Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20kernoviae_20[genbank_20GCA_5F000448265.2_202016-06- 02] 5,026 sequences; 39,481,229 total letters Query= NC_011335.1 Length=119343 Score E Sequences producing significant alignments: (Bits) Value seq3584 82.4 6e-11 >seq3584 Length=18754 Score = 82.4 bits (90), Expect = 6e-11 Identities = 139/199 (70%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 108391 TACAAGGCCACCGCCC-CGTTCAGGGTGTTCCTGGCGCTTTGCTTCTCGGTGGCAGGACA 108449 |||||||||| | || ||| | | | ||||| ||||||| | | |||| || Sbjct 8584 TACAAGGCCAATGGCCTCGTGC-GCTTCTTCCTCATGCTTTGCAACGCCATGGCCAACCA 8526 Query 108450 GAACACCATCCCGCAGTGGGTGCTCGATCACAGGGTTCACCACAAGTACTCTGACACGAC 108509 | ||||||| || ||| | ||| ||| | || |||||||||||||| ||||||| Sbjct 8525 GGGCACCATCTTCCACTGGAGTCGCGACCACCGTGTGCACCACAAGTACTCGGACACGAG 8466 Query 108510 GGCCGACCCACACAACGCCAACAGGGGGTTCTGGTTCTCGCACGTGGGATGGCTCATGAT 108569 |||||||| |||||| || | || |||| || | ||| |||| ||||| || | Sbjct 8465 TGCCGACCCGCACAACTCCGGTCGCGGCTTCTTCTTTGCACACATGGGCTGGCTGCTGGT 8406 Query 108570 GACCAAGGACCCCGACGTG 108588 || ||||||||| | ||| Sbjct 8405 GAAGAAGGACCCCAAGGTG 8387 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381749414745744