Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20kernoviae_20[genbank_20GCA_5F000785725.2_202015-10- 23] 2,070 sequences; 36,712,010 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq237 127 2e-24 seq1125 102 7e-17 >seq237 Length=40644 Score = 127 bits (140), Expect = 2e-24 Identities = 303/457 (66%), Gaps = 6/457 (1%) Strand=Plus/Minus Query 132917 GCGCAAATAATACATGCCCGTTTTCAGTTTTTTCTCCCACGCGTAAAAGTGTATGCTCGA 132976 ||||| || ||||||||||| || || |||| ||||||||||||||| || ||| Sbjct 3042 GCGCATGTAGTACATGCCCGTCTTGAGCCCCTTCTTCCACGCGTAAAAGTGCAT---CGA 2986 Query 132977 CACCACCGAG---TAAGTGGGTTCGGCGACAAATAAATTCAGCGATTGACTCTGATCTAT 133033 | | | | || |||||||||| | |||||||| ||||||||| || Sbjct 2985 TGTAAGCTTGCTTTTTGTCGGTTCGGCGATGTGAATGTTCAGCGACTGACTCTGACAGAT 2926 Query 133034 GAAAGGAGCACGGTCGGCGGCCATGTTTATTATACACTTTGATTTGATCTCCCATGCCGT 133093 | | | | |||| || || | || || | || |||| ||||||||||| |||| Sbjct 2925 GTAGGCACCACGATCCGCAGACAGGTCCAGAATCGACTTCTGCTTGATCTCCCACACCGT 2866 Query 133094 CTTGAAGAGATTCTTGACATGCTGTGGTATTTCGTCAATGTTCTGCACGGACCCGTTTTC 133153 |||| | | ||||| || | || || | | |||||||| || ||| || Sbjct 2865 CTTGTACTTCTCCTTGATGTGGTCCGGAATGGAGCTCACATTCTGCACCGAACCGCCGTC 2806 Query 133154 GGCCAAAATCTTGTTGCGCAATTCCGGAGTGTAAATGTCGAGATCGATTAGCGCTTTGAC 133213 ||| |||| ||| |||| || |||| | | | || || || ||| | || | Sbjct 2805 ATTCAAGATCTGGTTACGCACCTCAGGAGCCCACACACCCAGCTCAATCAGCTCATTCAT 2746 Query 133214 GAGATACTGGTTGACCACTTGAAACTCGCCGGCGAGAACGCGTCTGAGATATACATTCGA 133273 || |||| ||| || | |||||| || || || ||||| | | || | || || Sbjct 2745 CAGGTACTTGTTCACGATGGTAAACTCTCCCGCAAGCACGCGGCGGTTGTACATGTTAGA 2686 Query 133274 CGTGAACGGTTCGAAAGATTCGTTGTTGCCGAGTATCTGCGCCGTCGTCGCCGTGGGCAT 133333 ||||||||||||| ||| ||||| || ||||| ||||| ||||| | |||||| ||||| Sbjct 2685 GGTGAACGGTTCGATAGACTCGTTATTACCGAGGATCTGTGCCGTAGACGCCGTCGGCAT 2626 Query 133334 GTACGCCACCAACAAAGAGTTTCTTACGCCGTACTTG 133370 ||| |||| | || || | | ||||| |||| Sbjct 2625 CGGCGCGACCAGGAGCGAATTGCGCAGGCCGTTCTTG 2589 >seq1125 Length=3167 Score = 102 bits (112), Expect = 7e-17 Identities = 136/189 (72%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 118551 TTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATG 118610 || || |||||||| || | ||||| ||||||||||| || || ||| |||| Sbjct 850 TTCTGGATGTTGTAGTCCGAGAGCGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATC 791 Query 118611 AGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCG 118670 ||||||||||| || || || || ||||||||||| ||||| || || || | || Sbjct 790 AGACGCTGCTGGTCAGGCGGAATTCCCTCCTTGTCCTGGATTTTCTGCTTGACATTGTCA 731 Query 118671 ACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAA 118730 | | |||||| ||| || |||| || | || ||||| ||||| || || ||||| Sbjct 730 ATGCTGTCCGACGGCTCCACGTCGAGCGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAG 671 Query 118731 ATCTGCATG 118739 ||||||||| Sbjct 670 ATCTGCATG 662 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433819455272440