Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20kernoviae_20[genbank_20GCA_5F000785725.2_202015-10- 23] 2,070 sequences; 36,712,010 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq67 170 2e-37 >seq67 Length=90363 Score = 170 bits (188), Expect = 2e-37 Identities = 309/449 (69%), Gaps = 6/449 (1%) Strand=Plus/Minus Query 20889 GGAAACGGACGCGGGGTCCTCCGCAGCTGAAGCAGCAGGGGATCAACGTGGTTGTTGTAA 20948 || || || |||||||| | | ||||| | || || || |||||||| ||| Sbjct 88684 GGGAATGGTCGCGGGGTGCGCGTTAGCTGTTTTTGAAGCGGCTCTACGTGGTTCAGGTAT 88625 Query 20949 ACGTGGGCGTCACCCAAGGTGTGCACAAAGTCTCCCGGGGTCAGGCCCGTGACGTGAGCG 21008 ||||| || ||||| | |||| | ||| || || || ||| || | || || || Sbjct 88624 ACGTGTGCATCACCAATAATGTGGATAAATTCGCCAGGTTTCAAACCAGCCACTTGGGCC 88565 Query 21009 ATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACGGGACCCCGAGGCCCATGTCG 21068 | || |||||| || || || ||||||||||| ||||| || |||||||||||||| Sbjct 88564 ACAAGTCGCGTCAGTAGCGCATAACTGGCGATGTTGAACGGCACGCCGAGGCCCATGTCA 88505 Query 21069 GCGGACCTCTGGTACAGCTGGCAGGACAGCTCCCCCCGAGCCACGTAAAACTGACACAAA 21128 || || | |||||||| ||| || || | ||| || ||||||||||||||||| || Sbjct 88504 GCCGAACGCTGGTACATCTGACACGATAACTCGCCATCCGCCACGTAAAACTGACAAAAC 88445 Query 21129 ACGTGACAAGGAGGGAGAGCCATCCGCGCGAGGTCCGCGGGGTTCCACGCGCACATAACG 21188 | |||||| || || || |||||| ||| ||||| || |||||||| ||| || Sbjct 88444 ATGTGACATGGTGGCAGCGCCATCTCATTGAGATCCGCTGGATTCCACGCAGACAACACA 88385 Query 21189 ATGCGCCGATCGTGGGGCCGCCTGT---TAATTAGATCCACCACGTAACGCAGCTGGTCC 21245 || || || ||| || | ||| || || | | | ||| | | || || ||| Sbjct 88384 ATCCGACGGTCGGTCGG--GTTTGTGCGTAGTTTG-TGGATCACCTCAGCAAGTTGATCC 88328 Query 21246 ACCCCCTGACCCTCGTAGTTGGCGTCGGCCCCCCTGTACTCCGCCCCAAAATGTCTCCAC 21305 |||||||| || ||||| || | || |||||| || ||||| || | |||| Sbjct 88327 ACCCCCTGTCCAGTGTAGTCTGCATGCATATCCGTGTACTTGGCTCCAAAGTGACGCCAC 88268 Query 21306 TGGAACCCGTACACCGGCCCCAGATCGCC 21334 ||||| || ||||| || ||||| || || Sbjct 88267 TGGAATCCATACACTGGTCCCAGGTCTCC 88239 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427765208013600