Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20kernoviae_20[genbank_20GCA_5F000785725.2_202015-10- 23] 2,070 sequences; 36,712,010 total letters Query= NC_028776.1 Length=59670 Score E Sequences producing significant alignments: (Bits) Value seq29 84.2 8e-12 >seq29 Length=138055 Score = 84.2 bits (92), Expect = 8e-12 Identities = 139/196 (71%), Gaps = 10/196 (5%) Strand=Plus/Minus Query 30245 GCAATCTGGTTAGTAAGACGTTCCTGAACTTGCAGTCGACGACTAAAAGCATCCACAACG 30304 |||||||| || || || |||||||| || ||||| ||||| |||| | ||| || Sbjct 18006 GCAATCTGCTTGGTCAGTCGTTCCTGGACCTGCAGACGACGTGCAAAAACCTCCGAGACT 17947 Query 30305 CGAGACAGCTTACTAAGCCCAACGATCTTCCCATTGGGGACATAACCCACAACAGCAC-- 30362 | | ||| ||||| || || | || |||||| ||||| | || || | |||| Sbjct 17946 CTGGCCAGTTTACTGAGTCCCAGGACCTTCCCGTTGGGAATGTACCCGATGT--GCACTT 17889 Query 30363 -GCCCGATAATAGGAGCCATGTGATGCTCACAATGACTGTATACAGG--AATATCACGGA 30419 ||||| ||| ||| ||||||| |||||||| | || ||||| | ||| || || | Sbjct 17888 TGCCCGTGAATGGGA-CCATGTGGTGCTCACAC--ATTGAATACAAGTCAATGTCCCGCA 17832 Query 30420 CAATGACCATTTCATC 30435 |||||||||| || || Sbjct 17831 CAATGACCATCTCGTC 17816 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 190817709346880