Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20kernoviae_20[genbank_20GCA_5F000785735.2_202015-10- 23] 1,922 sequences; 36,590,891 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq134 100 2e-16 >seq134 Length=62988 Score = 100 bits (110), Expect = 2e-16 Identities = 118/160 (74%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 22741 CGTCTCTTGGCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATA 22800 ||||| |||| ||||| ||||| || || || | || || || || ||| |||| Sbjct 14380 CGTCTTCTGGCATTTGCAGCTGTGGAGGGAATCTTCTTCTCGGGCTCCTTTTGCTCCATC 14321 Query 22801 TTCTGGCTGAAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGC 22860 |||||||| ||||| ||| |||||||| || || || ||||||||| | ||||| Sbjct 14320 TTCTGGCTCAAGAAGCGTGGTCTCATGCCTGGTCTGAGCTTCTCCAACGAGCTCATTAGT 14261 Query 22861 CGTGACGAAGGTCTACACTGTGACTTTGCTTGTATGCTGT 22900 ||||| |||||| | ||| |||||||||||| || ||| Sbjct 14260 CGTGATGAAGGTATGCACACAGACTTTGCTTGTCTGTTGT 14221 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356225255450566