Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20kernoviae_20[genbank_20GCA_5F000785735.2_202015-10- 23] 1,922 sequences; 36,590,891 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq213 150 3e-31 >seq213 Length=42570 Score = 150 bits (166), Expect = 3e-31 Identities = 336/496 (68%), Gaps = 10/496 (2%) Strand=Plus/Minus Query 203839 CTTGTCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAGATAGTACATGCC 203898 ||||||||| |||||||| ||||||| | || | | | || ||||||||||| Sbjct 3084 CTTGTCCACGGTGAACTGGATGGCGTCAGCTTTCGGGCGTCCGCGCATGTAGTACATGCC 3025 Query 203899 GGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGG 203958 ||||| || ||||||| |||| |||| | |||||| || | || ||||| | || Sbjct 3024 CGTCTTGAGCCCCTTCTTCCACGCGTAAAAGTGCATCGATGTAAGCTTGCTTTTTGTCGG 2965 Query 203959 GTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGCGG 204017 ||||| |||||||||||||| ||||| || || |||| | ||| || ||||| || | Sbjct 2964 TTCGGCGATGTGAATGTTCAGCGACTGACTCTGACAGATGTA-GGCACCACGATCCGCAG 2906 Query 204018 CCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGTCTCTGGTGT 204077 || | | ||| | ||||||| |||||||||||||||||| || || || ||| Sbjct 2905 ACAGGTCCAGAATCGACTTCTGCTTGATCTCCCACACCGTCTTGTACTTCTCCTTGATGT 2846 Query 204078 GTTGAGGCA--CATCTTCCCACGTCCTG-ATCGAGCCGTTGTCGGCCATCAGTCT-CATC 204133 | | || | | || ||| | ||| | ||| ||| ||| || | ||| | Sbjct 2845 GGTCCGGAATGGAGCT---CACATTCTGCACCGAACCGCCGTCATTCAAGA-TCTGGTTA 2790 Query 204134 CTCGTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGATG 204193 | | ||| |||||| |||| | |||||||| || ||||| ||| | | Sbjct 2789 CGCACCTCAGGAGCCCACACACCCAGCTCAATCAGCTCATTCATCAGGTACTTGTTCACG 2730 Query 204194 ATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAAC 204253 || ||| ||||| | ||||| | ||| || ||| ||| |||||| ||||||| Sbjct 2729 ATGGTAAACTCTCCCGCAAGCACGCGGCGGTTGTACATGTTAGAGGTGAACGGTTCGATA 2670 Query 204254 GCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGG 204313 | |||||| || |||| ||||| || || ||||| ||||| || || | || || Sbjct 2669 GACTCGTTATTACCGAGGATCTGTGCCGTAGACGCCGTCGGCATCGGCGCGACCAGGAGC 2610 Query 204314 GAGTTGCGCACACCGT 204329 || ||||||| |||| Sbjct 2609 GAATTGCGCAGGCCGT 2594 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795136096396320