Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20kernoviae_20[genbank_20GCA_5F001707905.1_202016-08- 18] 2,393 sequences; 38,203,779 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq1777 82.4 9e-11 >seq1777 Length=20937 Score = 82.4 bits (90), Expect = 9e-11 Identities = 119/168 (71%), Gaps = 0/168 (0%) Strand=Plus/Minus Query 157936 CTTGAGAATCCTAGTTGGTACACATCTTACACTCCCTATCAAGCTGAGATATCTCAGGGA 157995 || |||||||| | ||||| || || || || || || ||||||||| ||||||| || Sbjct 9907 CTGGAGAATCCCGGATGGTATACGTCGTATACACCGTACCAAGCTGAGGTATCTCAAGGT 9848 Query 157996 AGATTGGAAGCTTTATTCAATTACCAAACGCTCATCACAGAACTCACAGGACTACCGATA 158055 || |||| | || || | ||| ||| | | || ||||||||| || | | Sbjct 9847 CGACTGGAGATGCTGTTAAACTTCCAGACGATGGTACTGGAGCTCACAGGATTAGAGTTC 9788 Query 158056 GCAAACGCATCTCTATTAGATGAAGCAACTGCAGCAGCAGAAGCAATG 158103 || || || || ||| | ||||||||||| ||||| || ||||| ||| Sbjct 9787 GCCAATGCTTCACTACTGGATGAAGCAACAGCAGCTGCTGAAGCGATG 9740 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588033609918480