Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20kernoviae_20[genbank_20GCA_5F001707905.1_202016-08- 18] 2,393 sequences; 38,203,779 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq905 183 4e-41 >seq905 Length=95649 Score = 183 bits (202), Expect = 4e-41 Identities = 321/456 (70%), Gaps = 16/456 (4%) Strand=Plus/Minus Query 146882 TGGGGAAGGGTCGGGGGTTCCTGGCCAGCTGAATTTTCAGGGGCTCCACGTGGTTGAGGT 146941 |||| || ||||| ||| | | | ||||| | | || ||||| | |||||| |||| Sbjct 89019 TGGGAAATGGTCGCGGGGTGCGCGTTAGCTGCTTCTGAAGCGGCTCTATGTGGTTCAGGT 88960 Query 146942 AGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCCGGCTTAAGGCCGGTCACGTGGG 147001 | ||||| || || || | |||| | ||| || || | || | || | ||| |||| Sbjct 88959 ATACGTGTGCATCACCAATAATGTGGATAAATTCGCCAGATTTCAAACCAGCCACTTGGG 88900 Query 147002 CCACCATGTAG-GTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACCCCCAGGCCCATG 147060 |||| | || | || || |||| || ||||| |||||||| || || || ||||||||| Sbjct 88899 CCACAA-GTCGCGTCAGTAGCGCATAACTGGCGATGTTGAACGGCACGCCGAGGCCCATG 88841 Query 147061 TCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTCGGCCACGTAAAACTGGCAC 147120 || | || | |||||||| |||||||| | || || || |||||||||||||| || Sbjct 88840 TCAGCTGAACGCTGGTACATTTGGCACGACAATTCGCCATCCGCCACGTAAAACTGACAA 88781 Query 147121 AGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGCGGGGTTCCAGGCCGAGACC 147180 | ||||| || || ||||||||||| | || || || || ||||| || || | | Sbjct 88780 AACATGTGACATGGTGGCAGCGCCATCTCATTGAGATCTGCCGGATTCCACGCAGACAAC 88721 Query 147181 ACCAGCCGCCTG-CTCTCGGGGTTCCT-CTTAATCTCTTCGATAACCCACCTCAGC---- 147234 || | ||| | | | || |||||| | | ||| | | ||| ||||||||| Sbjct 88720 ACAATCCGACGGTCGGTC-GGGTTCGTGCGCAAT-TTGTGGAT----CACCTCAGCAAGT 88667 Query 147235 TGGTCCACGCCCTGGCCCCCGTAGTTTGTCCCGCA-GTCCACGTACCTGGCCCCAAAGTG 147293 || ||||| || || || ||||| || | ||| ||| |||| |||| |||||||| Sbjct 88666 TGATCCACCCCTTGTCCAGTGTAGTCTG-CATGCATATCCGTGTACTTGGCTCCAAAGTG 88608 Query 147294 CCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCC 147329 | ||||||||| || || ||||| |||||||| || Sbjct 88607 ACGCCACTGGAATCCATAAACTGGTCCCAGGTCTCC 88572 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583470546415200