Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20kernoviae_20[genbank_20GCA_5F001712645.1_202016-08- 24] 2,830 sequences; 37,002,228 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq2551 230 3e-55 >seq2551 Length=89002 Score = 230 bits (254), Expect = 3e-55 Identities = 329/455 (72%), Gaps = 14/455 (3%) Strand=Plus/Plus Query 146882 TGGGGAAGGGTCGGGGGTTCCTGGCCAGCTGAATTTTCAGGGGCTCCACGTGGTTGAGGT 146941 ||||||| ||||| ||| | | || ||||| | | || ||||| |||||||| |||| Sbjct 748 TGGGGAATGGTCGCGGGGTGCGTGCTAGCTGCTTCTGAAGCGGCTCTACGTGGTTCAGGT 807 Query 146942 AGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCCGGCTTAAGGCCGGTCACGTGGG 147001 | ||||| || || || | |||| | ||| || || || || | || | ||| |||| Sbjct 808 ATACGTGTGCATCGCCAATAATGTGGATAAATTCGCCAGGTTTCAAACCAGCCACTTGGG 867 Query 147002 CCACCATGTAG-GTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACCCCCAGGCCCATG 147060 |||| | || | || || |||| || ||||| |||||||| || || || ||||||||| Sbjct 868 CCACAA-GTCGCGTCAGTAGCGCATAACTGGCGATGTTGAACGGCACGCCGAGGCCCATG 926 Query 147061 TCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTCGGCCACGTAAAACTGGCAC 147120 || |||| | |||||||| ||||||||| | ||| || || |||||||||||||| || Sbjct 927 TCAGCCGAACGCTGGTACATCTGGCACGACAACTCGCCATCCGCCACGTAAAACTGACAA 986 Query 147121 AGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGCGGGGTTCCAGGCCGAGACC 147180 | ||||||||||||||||||||||| | || ||||| || ||||| || || | | Sbjct 987 AACATGTGGCACGGCGGCAGCGCCATCTCATTGAGATCCGCCGGATTCCACGCAGACAGC 1046 Query 147181 ACCAGCCGCCTG-CTCTCGGGGTTCCTCTTAATCTCTTCGATAACCCACCTCAGC----T 147235 || | ||| | | | || | |||| | | | | ||| ||||||||| | Sbjct 1047 ACAATCCGACGGTCGGTC-GAGTTCGTGCGCAGTTTGTGGAT----CACCTCAGCAAGTT 1101 Query 147236 GGTCCACGCCCTGGCCCCCGTAGTTTGTCCCGCA-GTCCACGTACCTGGCCCCAAAGTGC 147294 | ||||| ||||| || ||||| || | ||| ||| |||| |||| |||||||| Sbjct 1102 GATCCACTCCCTGTCCAGTGTAGTCTG-CATGCATATCCGTGTACTTGGCTCCAAAGTGA 1160 Query 147295 CTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCC 147329 | ||||||||| || |||||||| ||||| || || Sbjct 1161 CGCCACTGGAATCCATACACTGGTCCCAGATCTCC 1195 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583467359112000