Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20kernoviae_20[genbank_20GCA_5F001712655.1_202016-08- 24] 2,422 sequences; 38,111,184 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq1680 131 1e-25 >seq1680 Length=186158 Score = 131 bits (144), Expect = 1e-25 Identities = 269/400 (67%), Gaps = 0/400 (0%) Strand=Plus/Plus Query 20225 TGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATGTTGACATGAACA 20284 |||| || || |||||||| || ||| | || |||||||| | || || ||| | Sbjct 180307 TGGGACCAGTTTATGGATTCCAGTGGCGTCACTTTGGAGCCAAGTACACGGATATGCATG 180366 Query 20285 CAAATTATTTTGGACAAGGAGTAGATCAATTACAAAATGTTATTAATTTAATTAAAACGA 20344 || | || ||||||||| || |||||| | | || || | | | |||| Sbjct 180367 CAGACTACACTGGACAAGGGGTGGATCAACTTGCTGAGGTGATCCACAAATTGCGCACGA 180426 Query 20345 ACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAGATGTGCCTTTAATGG 20404 |||| | |||| | | ||| | || | || ||||| | |||| | | |||| Sbjct 180427 ACCCGACCGACCGTCGGATTGTGTTGTCTGCGTGGAATCCGGCAGATCTCAATGAGATGG 180486 Query 20405 CTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTTGCTAATAATGAATTGTCGTGTC 20464 | |||| |||||||| ||| | || || |||||||| || || ||||||||||| | Sbjct 180487 CGCTGCCACCATGTCACATGTTTTGTCAGTTTTACGTGGCGGATGGCGAATTGTCGTGCC 180546 Query 20465 AAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAATATTGCAAGTTATG 20524 ||||||| || || || ||||| ||||| || || || || ||||| || || ||||||| Sbjct 180547 AAATGTACCAGCGTTCAGCTGACATGGGCCTCGGCGTGCCGTTCAACATCGCCAGTTATG 180606 Query 20525 CGCTGCTTACGTATATGATTGCACATGTTACAGATTTAAAAACGGGTGACTTAGTCCACA 20584 |||| || ||| | | || || || | | ||| ||| | || || || |||||| Sbjct 180607 CGCTACTGACGCGACTTGTGGCCCAAGTGGCTGGTTTGAAATCTGGCGAATTTATCCACA 180666 Query 20585 CCATAGGAGACGCGCATATTTACCTTAATCATATAGAACC 20624 || || || || || | ||||| || || ||||| || Sbjct 180667 TTATTGGTGATGCACACGTATACCTGAACCACATAGAGCC 180706 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399172216836790