Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20kernoviae_20[genbank_20GCA_5F001712705.1_202016-08- 24] 1,910 sequences; 36,780,765 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq625 105 6e-18 >seq625 Length=11448 Score = 105 bits (116), Expect = 6e-18 Identities = 142/196 (72%), Gaps = 4/196 (2%) Strand=Plus/Minus Query 24993 GGAACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAG 25052 |||| ||||| || ||||| ||||| |||| || || ||||||| |||| |||||| Sbjct 2726 GGAATCATGCAGATCTTTGTGAAGACCCTGACGGGCAAGACCATCACGCTCGACGTGGAG 2667 Query 25053 TCGTCTGACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCAC 25110 |||| |||| || || || || ||||| |||||| ||||| || || ||||||| Sbjct 2666 CCGTCGGACAGCATTGA--CAATGTCAAGCAGAAAATCCAGGACAAGGAGGGAATTCCAC 2609 Query 25111 CTGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCG 25170 ||||||| ||||| | || || |||||||| || | || || | ||||| || | Sbjct 2608 CTGACCAGCAGCGTCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACGCTGTCGG 2549 Query 25171 ATTACAATATTCAAAA 25186 | ||||| || || || Sbjct 2548 ACTACAACATCCAGAA 2533 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433317912936650