Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20kernoviae_20[genbank_20GCA_5F001712715.1_202016-08- 24] 2,034 sequences; 37,458,212 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq88 131 1e-25 >seq88 Length=94159 Score = 131 bits (144), Expect = 1e-25 Identities = 269/400 (67%), Gaps = 0/400 (0%) Strand=Plus/Minus Query 20225 TGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATGTTGACATGAACA 20284 |||| || || |||||||| || ||| | || |||||||| | || || ||| | Sbjct 5852 TGGGACCAGTTTATGGATTCCAGTGGCGTCACTTTGGAGCCAAGTACACGGATATGCATG 5793 Query 20285 CAAATTATTTTGGACAAGGAGTAGATCAATTACAAAATGTTATTAATTTAATTAAAACGA 20344 || | || ||||||||| || |||||| | | || || | | | |||| Sbjct 5792 CAGACTACACTGGACAAGGGGTGGATCAACTTGCTGAGGTGATCCACAAATTGCGCACGA 5733 Query 20345 ACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAGATGTGCCTTTAATGG 20404 |||| | |||| | | ||| | || | || ||||| | |||| | | |||| Sbjct 5732 ACCCGACCGACCGTCGGATTGTGTTGTCTGCGTGGAATCCGGCAGATCTCAATGAGATGG 5673 Query 20405 CTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTTGCTAATAATGAATTGTCGTGTC 20464 | |||| |||||||| ||| | || || |||||||| || || ||||||||||| | Sbjct 5672 CGCTGCCACCATGTCACATGTTTTGTCAGTTTTACGTGGCGGATGGCGAATTGTCGTGCC 5613 Query 20465 AAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAATATTGCAAGTTATG 20524 ||||||| || || || ||||| ||||| || || || || ||||| || || ||||||| Sbjct 5612 AAATGTACCAGCGTTCAGCTGACATGGGCCTCGGCGTGCCGTTCAACATCGCCAGTTATG 5553 Query 20525 CGCTGCTTACGTATATGATTGCACATGTTACAGATTTAAAAACGGGTGACTTAGTCCACA 20584 |||| || ||| | | || || || | | ||| ||| | || || || |||||| Sbjct 5552 CGCTACTGACGCGACTTGTGGCCCAAGTGGCTGGTTTGAAATCTGGCGAATTTATCCACA 5493 Query 20585 CCATAGGAGACGCGCATATTTACCTTAATCATATAGAACC 20624 || || || || || | ||||| || || ||||| || Sbjct 5492 TTATTGGTGATGCACACGTATACCTGAACCACATAGAGCC 5453 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399174104478130