Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20kernoviae_20[genbank_20GCA_5F001712715.1_202016-08- 24] 2,034 sequences; 37,458,212 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq254 293 2e-74 seq9 168 6e-37 seq987 141 8e-29 seq624 122 8e-23 seq16 104 2e-17 seq519 102 7e-17 >seq254 Length=42645 Score = 293 bits (324), Expect = 2e-74 Identities = 1212/1892 (64%), Gaps = 39/1892 (2%) Strand=Plus/Plus Query 22105 CTTGTCCACTGTAAACTGTATGGCGTTTGCGGCCGGTTTGGTGCGAAGATAATACATGCC 22164 ||||||||| || ||||| ||||||| || ||| ||| | || |||||||| Sbjct 39559 CTTGTCCACGGTGAACTGGATGGCGTCAGCTTTCGGGCGTCCGCGCATGTAGTACATGCC 39618 Query 22165 CGTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTTCCATAACTCGG 22224 |||||| || ||| |||||||||||||||| || ||||| || | || | | |||| Sbjct 39619 CGTCTTGAGCCCCTTCTTCCACGCGTAAAAGTGCATCGATGTAAGCTTGCTTTTTGTCGG 39678 Query 22225 CAAGTCCATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCGGCGGC 22284 | | |||| | || | ||||||||||||| ||| | || || ||||| || | Sbjct 39679 TTCGGCGATGTGAATGTTCAGCGACTGACTCTGACAGATGTAGGCACCACGATCCGCAGA 39738 Query 22285 CATATTTATCAATGTACGCAT-CGACATTTCCCATACGGTCTTGTACAGTTGCCTGATCT 22343 || | | ||| || | | || ||||| || ||||||||| | | |||| | Sbjct 39739 CAGGTCCAG-AATCGACTTCTGCTTGATCTCCCACACCGTCTTGTACTTCTCCTTGATGT 39797 Query 22344 CTAACGGTATCGATTCGATCCTCTGGACGGACCCGTTATTGTGTATGATCAAATTTTTAA 22403 ||| || || | |||| || || ||| | | | |||| || | Sbjct 39798 GGTCCGGAATGGAGCTCACATTCTGCACCGAACCGCCGTCATTCAAGATCTGGTTACGCA 39857 Query 22404 TCGTATCGTTCCACAAACCGATGGCGGTCAAATCTTTGACCAGATGACGGTTCACCACTT 22463 | | ||||| ||| | | ||| || || | ||| | |||||| | Sbjct 39858 CCTCAGGAGCCCACACACCCAGCTCAATCAGCTCATTCATCAGGTACTTGTTCACGATGG 39917 Query 22464 GAAACTCGCCGGACAAG-ACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGAAAGAT 22522 |||||| || | |||| |||||||| | ||| ||||| || ||||||||||||| ||| Sbjct 39918 TAAACTCTCCCG-CAAGCACGCGGCGGTTGTACATGTTAGAGGTGAACGGTTCGATAGAC 39976 Query 22523 TCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGTAGCGAG 22582 || || || || || ||||| || || || || |||||||||||||| | ||| ||||| Sbjct 39977 TCGTTATTACCGAGGATCTGTGCCGTAGACGCCGTCGGCATCGGCGCGACCAGGAGCGAA 40036 Query 22583 TTTCTCAAGCCGTGCTTTGAAATTTTACTCTTGAGCATCGACCAGTCCCACAGATC---G 22639 || | || ||||| ||| | || ||| ||| | ||||||||||||| | | Sbjct 40037 TTGCGCAGGCCGTTCTTGACCACCTTCTCCTTAAGCGCAGCCCAGTCCCACAGACCGGAG 40096 Query 22640 GACGGCGTCACATTGTCCCACATATCGTATTGCAACACGCCGCGACTCGCCGGGCTGCCT 22699 || ||||| || || |||||||||| | || || | || || || || || Sbjct 40097 GAAGGCGTGAC---GTTCCACATATCGAACTGGAAGATACCCTTGCTGGCAGGCGAACCC 40153 Query 22700 TCGTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCCTCCAACGCGCCG 22759 | | | || |||||||| || || || ||| ||||| || ||||| | || Sbjct 40154 TGGAAAGTCTCGTACGGGCCCAATTCCGTGGCCAGTTCCATTGACGTCTCCATAGAAGCG 40213 Query 22760 TAATATATAGTCTCGAAGATTTTCTTGTTCAATTC-GGCGGCGGCGACGCTTTCGTACGG 22818 || || || ||||||||||| |||||||| | || ||| | || || ||| ||| Sbjct 40214 TAGTAGATGGTCTCGAAGATATTCTTGTTGAGCTCACGCGCCTCCG-GACTCTCGAACGC 40272 Query 22819 CATACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCGATCGGTCGGTT 22878 | ||| | | ||| |||||||| | ||||| || || ||||| | || |||| Sbjct 40273 AAAGTCCATGAGGATGAAAGCGTCCGCAAGGCCCTGCACACCAATACCAACAGGACGGTG 40332 Query 22879 TTTCAGATTCGACACTTTTGCCTCGGGCAAAGGATACCAATTCGAATCGATTGTTCTGTT 22938 || || || ||||| | || || | || ||||| |||| Sbjct 40333 ACGCATGTTGGAATTGCGAGCCTCAATAACGGGGTAGTAGTTGACGTCGATGACCTTGTT 40392 Query 22939 CAAGTT---TCTGGTCACAATTTTCGTTATNNNNNNNNNNNNNTCAAAGTCGTAAACGCC 22995 || ||| | || |||| || || || | ||| | | ||| | Sbjct 40393 CAGGTTGCGTGTGATCAC-CTTGACGACAT--CATACAGCTTCTTGTAGTTGAATACGGC 40449 Query 22996 CGATTGTACAACAAACTTGTTGACGGCGATCGAGGCAAGATTGCATACGGCCACCTCGTC 23055 || | |||| |||||| || || | || || | ||||| ||||||||||| || Sbjct 40450 --GTTCT-CAACGAACTTGGGGAGCGCCACGGACGCCAAGTTGCACACGGCCACCTCATC 40506 Query 23056 TTTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGTGCCCAAATT 23115 ||||| ||||| | | ||| || | ||||| | |||||||| | || Sbjct 40507 AGGCGACGTATACTCCATCACTTCACAGCACAAGTTGCTCGAGCGAATCGTGCCGAGGTT 40566 Query 23116 GCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTGCCCGTCTC 23175 ||| || || || ||| | |||||||| | |||| | ||| ||||||||| Sbjct 40567 CTGCTGATTAGACTTGCGGTTGGCGGCGTCCTTGTATAACATGAAAGGCACGCCCGTCTC 40626 Query 23176 GACCTGCGACTCGATGATCGCTCGCCACATAGTCTGAGCGTGAACACGTCGCACGTAC-C 23234 | ||||| || | || || ||||| ||||| | | ||| || | | Sbjct 40627 AATCTGCGCGTCCAGAATAGCGAACCACAGCTGTTGAGCATTGA-TTGTCTTGCGGGCGC 40685 Query 23235 TGCCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGCACCGTAACAGTCGGCCA 23294 |||||| ||||||||| | ||| || || || || | || | || ||| || Sbjct 40686 GGCCTTCACGCTCGTACTTCTCAAACAGCGTCTCGAACTCCTCTCCCCAGCACTCGTACA 40745 Query 23295 GGCCGGGCGATTGCATCGGACACATGAGACTCCACATTGAGTCATT---TTCAACGCGTC 23351 | ||||| | | | ||||| | | ||||||| | | |||| || || || Sbjct 40746 GACCGGGAGCCTCGTTGGGACAGAACAAACTCCACTT---GCCATTGGCCTCCACACGCT 40802 Query 23352 TCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTT 23411 |||| || |||||||| | ||| ||||| ||||||| || || || || | ||| | Sbjct 40803 TCATGAATAGATCCGGCACCCACAGAGCATAGAACAAGTCACGTGCACGGTGCAGCTCGT 40862 Query 23412 TGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGT 23471 | || |||||| || |||||| || || ||||| || || |||||||| || || | Sbjct 40863 TACCATGGTTCTTGCGCAGATCCAAGAACTCAAACACATCAGCGTGCCACGGTTCCAGAT 40922 Query 23472 AAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGT 23531 ||| ||||| | ||| | ||| || ||||| || |||||||| ||||| | || Sbjct 40923 AAATCGCAAATGATCCCTTGCGTTTACCTCCACCCTGGTCCACGTAACGTGCCGTATCGT 40982 Query 23532 TGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCCGCCACACTCG 23591 | |||||| ||||| || | || |||||||||| |||| | || ||| | | Sbjct 40983 TAAACACTCGCAGCATGGGGATGATGCCGTTGGACGAGCCG--TTCG--TGCCGCGGATG 41038 Query 23592 AACCTTTT----GCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGAT 23647 | || || ||||| | |||||| | || || |||||||| || | || || Sbjct 41039 TAGCTGTTAGTAGCTCGGATGTTGTGCATACTGATGCCAATGCCTCCTGCCCACTTGGAG 41098 Query 23648 ATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCG 23707 || ||| || |||||||||||||| || ||||| || || ||| || | | || Sbjct 41099 ATGCACGCACACTGTTTCAGAGTGTCATAAATGCCTTCAATAGAGTCATCCTGCATGGCC 41158 Query 23708 ACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTG 23767 | |||||| |||||||||| ||| | || ||| | || |||||| || ||| || Sbjct 41159 AACAAGAAGCACGAAGACAATTGTGGACGTGGGGTACCAGCATTGAACAGCGTGGGGGTG 41218 Query 23768 GCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATCAATG-TC 23826 ||||| || ||| || | |||||| || | ||| || || | || || | ||| || Sbjct 41219 GCGTGGGTGAAGAATTTTTGCGACATGAGTTCGTAAGTCTCAAGTGCCGCCTTGATGTTC 41278 Query 23827 CTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCGACCGTGAC 23886 ||| ||| || || | || |||||||| ||||| | || || | || ||| Sbjct 41279 GTCT-TGTGGATGCCTAGAGCCACGCGCATGATCATCTGCTGGGGACGTTCCACCACTTT 41337 Query 23887 GCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAGTCATAGTT 23946 ||||| | ||| |||||| | | || || ||||| |||||||| || || | Sbjct 41338 GCCGTGGACACGGAAGAGATATCCCCTCTCCAGTGTCTTAAAGCCAAAATAATCGTATTC 41397 Query 23947 AAAGTCACGATCGTGCACTATGGCCGAATTCA 23978 |||||| || || || | |||||||| |||| Sbjct 41398 AAAGTCTCGGTCATGGATAATGGCCGAGTTCA 41429 >seq9 Length=255281 Score = 168 bits (186), Expect = 6e-37 Identities = 546/834 (65%), Gaps = 14/834 (2%) Strand=Plus/Plus Query 57567 GACATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGAC 57626 ||| | ||| | |||||||| ||||| || || || ||||| | ||||| | ||| Sbjct 48276 GACGTGTGGCAGATGTACAAGAAGGCGGAGGCCAGCTTCTGGACTGCGGAAGAGCTGGAC 48335 Query 57627 CTGTCTAAGGATCTGAGCGATTGGGATTCCCTCAAAGAATCTGAGAGAAATTTTATTAAA 57686 || | || || | || |||| ||||| ||| ||| | | || || || Sbjct 48336 TTGGTACACGACCTCAAGGACTGGGGAAACCTCACAGACAACGAGCGTCACTTCATCAAG 48395 Query 57687 CACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGA 57746 ||||| ||||| || || ||||| ||||| || || |||||||| ||| | | | Sbjct 48396 CACGTCTTGGCCTTCTTTGCCGCCAGTGATGGCATCGTGAACGAGAACCTGG-CTATGAA 48454 Query 57747 TTTTCACAA-GAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCAT 57805 ||| ||| ||||| || ||| | ||||| | ||||| ||||| || ||| | ||||| Sbjct 48455 CTTTAGCAATGAAGTACAGGTGCCTGAGGCTCGTTGCTTCTACGGCTTCCAAATTGCCAT 48514 Query 57806 TGAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGACAACGA 57865 ||| ||| | || ||||| |||| ||||| ||||| || |||||| | |||||| | Sbjct 48515 TGAGAACATCCACTCAGAGGTGTACTCGCTGCTCATTGACACGTACATCAAGGACGCTGT 48574 Query 57866 CGAGAAACGTAGACTGTTCAACGCGATCGAAACAATGCCCGCGATCG-CCAAGAAGGCAG 57924 ||||| ||| | || || || || || |||| | | |||||||||| | Sbjct 48575 GGAGAAGGACCACCTGCTGCGTGCAATTGAGACCAT-CCCGTGTGTGACCAAGAAGGC-G 48632 Query 57925 AGT-GGTCAATCAAATGGATAAAAAGCGCCACGG-CCACGTTCGCCGAGAGGCTAATCGC 57982 ||| || | | | |||| | | || | | || | | | | ||| | || | || Sbjct 48633 AGTTGGGCGCTAAGATGG-TGCGACCCGAAAGTGTCCTCATACCCGGAGCGTCTTCTGGC 48691 Query 57983 GTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATGAA 58042 || || || || || || || ||||| |||||| |||| | || || ||| | || Sbjct 48692 ATTTGCAGCTGTGGAGGGAATCTTCTTCTCGGGCTCCTTTTGCTCCATCTTCTGGCTCAA 48751 Query 58043 GAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAGGG 58102 ||| || || || ||||| || |||| || ||||||| | || || || || || Sbjct 48752 GAAGCGTGGTCTCATGCCTGGTCTGAGCTTCTCCAACGAGCTCATTAGTCGTGATGAAGG 48811 Query 58103 TCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAATAAACCGACGCGGGA 58162 | | || || || ||||| || || ||||||| | | || | || | | || | | Sbjct 48812 TATGCACACAGACTTTGCTTGTCTGTTGTACTCGAAGCTGGTGACCAAGCTGCCGGAGCA 48871 Query 58163 TCGCATCTTGGACATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTCACCGAAGC 58222 || | || |||||| || || || ||||||| | |||||||| | ||| | Sbjct 48872 GCGTGTGCACGAGATTATCCGTGACGCTGTGAAGATCGAACACGAGTTTGTGAGCGACTC 48931 Query 58223 CCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTACATTGAGTTTGT 58282 || || |||| || |||| |||||| | | |||| ||||||||||||| || Sbjct 48932 GCTCCCAGTGGAGCTGATCGGCATGAACTCGGCGCTCATGTGCCAGTACATTGAGTTCGT 48991 Query 58283 TGCCGACAGACTTTTGCTCGAACTGATTGGAGAG--CGTCAT-TACAACACGAAAAATCC 58339 || ||| | | |||| | | |||| | | | || |||||| || || || Sbjct 48992 GGCAGACCGCC---TGCTGTATTCGCTTGGTGTGTCCAAGATCTACAACGTCAAGAACCC 49048 Query 58340 GTTTGATTTTATGAATCTGATCTCGCTCGAGGGCAAGACAAACTTTTTCGAAAA 58393 |||||| | ||| | ||||||| || |||||||||| ||||| ||||| || Sbjct 49049 GTTTGACTGGATGGACATGATCTCTCTACAGGGCAAGACTAACTTCTTCGAGAA 49102 >seq987 Length=4295 Score = 141 bits (156), Expect = 8e-29 Identities = 161/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249 || ||||| || || || ||||| ||||| ||||| || ||||| ||||||| || || Sbjct 218 AAGATGCAGATCTTTGTGAAGACACTGACGGGCAAGACCATCACGCTCGACGTGGAGCCT 159 Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309 || ||| |||| | || || |||| ||| |||||||||||| | ||||| ||| Sbjct 158 TCGGACTCGATCGACAATGTGAAGCAGAAAATCCAAGACAAGGAAGGCATCCCGCCTGAC 99 Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369 ||||||||||| || ||||| ||||| ||| |||| ||| | || ||||||| || Sbjct 98 CAGCAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGACGGTCGCACGCTGAGCGACTAC 39 Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACTT 31405 ||||| || || || || || ||||| ||||| ||| Sbjct 38 AACATCCAGAAGGAGTCTACACTTCACCTGGTGCTT 3 Score = 141 bits (156), Expect = 8e-29 Identities = 161/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249 || ||||| || || || ||||| ||||| ||||| || ||||| ||||||| || || Sbjct 4078 AAGATGCAGATCTTTGTGAAGACACTGACGGGCAAGACCATCACGCTCGACGTGGAGCCT 4137 Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309 || ||| |||| | || || |||| ||| |||||||||||| | ||||| ||| Sbjct 4138 TCGGACTCGATCGACAATGTGAAGCAGAAAATCCAAGACAAGGAAGGCATCCCGCCTGAC 4197 Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369 ||||||||||| || ||||| ||||| ||| |||| ||| | || ||||||| || Sbjct 4198 CAGCAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGACGGTCGCACGCTGAGCGACTAC 4257 Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACTT 31405 ||||| || || || || || ||||| ||||| ||| Sbjct 4258 AACATCCAGAAGGAGTCTACACTTCACCTGGTGCTT 4293 >seq624 Length=11309 Score = 122 bits (134), Expect = 8e-23 Identities = 123/160 (77%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 31189 AAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACC 31248 || |||||| || || || ||||| ||||| ||||| || ||||| ||||||| || || Sbjct 8476 AATCATGCAGATCTTTGTGAAGACCCTGACGGGCAAGACCATCACGCTCGACGTGGAGCC 8535 Query 31249 GTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGA 31308 ||| ||||| | || | ||||| |||| ||| ||||||||| || | ||||| || Sbjct 8536 GTCGGACAGCATTGACAATGTCAAGCAGAAAATCCAGGACAAGGAGGGAATTCCGCCTGA 8595 Query 31309 CCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGAC 31348 |||||||||||| || ||||| ||||| ||| | || ||| Sbjct 8596 CCAGCAGCGTCTGATCTTCGCCGGCAAGCAGCTCGAGGAC 8635 >seq16 Length=215431 Score = 104 bits (114), Expect = 2e-17 Identities = 102/132 (77%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 31290 AGGAAGGCGTGCCGCCCGACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACT 31349 |||||||| | ||||| |||||||||||||| || ||||| ||||| ||| |||| ||| Sbjct 1 AGGAAGGCATCCCGCCTGACCAGCAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGACG 60 Query 31350 CTATGACTATGAGCGATTATAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGAC 31409 | || ||||||| || ||||| || || || || || ||||| ||||| ||| | | Sbjct 61 GTCGCACGCTGAGCGACTACAACATCCAGAAGGAGTCTACACTTCACCTGGTGCTTCGCC 120 Query 31410 TGAGGGGCGGTA 31421 || | ||||||| Sbjct 121 TGCGTGGCGGTA 132 >seq519 Length=15923 Score = 102 bits (112), Expect = 7e-17 Identities = 103/134 (77%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 31286 GACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAA 31345 |||||||||||| | ||||| |||||||||||||| || ||||| ||||| ||| |||| Sbjct 6 GACAAGGAAGGCATCCCGCCTGACCAGCAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAG 65 Query 31346 GACTCTATGACTATGAGCGATTATAACATTCAAAAAGAATCGACTCTTCATCTGGTACTT 31405 ||| | || ||||||| || ||||| || || || || || ||||| ||||| ||| Sbjct 66 GACGGTCGCACGCTGAGCGACTACAACATCCAGAAGGAGTCTACACTTCACCTGGTGCTT 125 Query 31406 AGACTGAGGGGCGG 31419 | || | ||||| Sbjct 126 CGTCTTCGTGGCGG 139 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445755066389280