Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20kernoviae_20[genbank_20GCA_5F001712715.1_202016-08- 24] 2,034 sequences; 37,458,212 total letters Query= NC_026927.1 Length=228143 Score E Sequences producing significant alignments: (Bits) Value seq43 95.1 2e-14 >seq43 Length=140459 Score = 95.1 bits (104), Expect = 2e-14 Identities = 241/367 (66%), Gaps = 0/367 (0%) Strand=Plus/Plus Query 161313 TCTACCAGGCATCCACCAGTGAGTTGTATGGGTTGGTACAAGAGACACCACAGAAAGAAA 161372 |||||||||| ||||| ||||| ||||| ||| ||||| || || || ||| | ||| Sbjct 7085 TCTACCAGGCCTCCACAAGTGAATTGTACGGGAAGGTACGAGCCACGCCGCAGGATGAAG 7144 Query 161373 CAACACCTTTCTACCCACGATCTCCATATGGCGTAGCTAAACTCTATGGATATTGGATTG 161432 ||||| ||| ||||||| || || ||||| | || || | | || | ||||| || Sbjct 7145 ATACACCATTCCACCCACGCTCGCCGTATGGAATTGCGAAGCAATTTGCCTTTTGGAGTG 7204 Query 161433 TAAAGAACTACAGAGAGAGTTATGGGATGCACGCCAGTAGTGGTATTCTATTCAACCATG 161492 | || || | || ||| || ||| ||| | || || || |||||||| | Sbjct 7205 TGGTAAATCACCGCGAAGCTTACGGAATGTTCGCTGTGAACGGAATCCTGTTCAACCACG 7264 Query 161493 AGTCACCACGACGGGGTGAGACTTTCGTAACCCGTAAGATTACTAGGGGACTATCCCGTA 161552 || ||||| || || |||||| | || | ||| | || | | | || | Sbjct 7265 AGAGTCCACGGCGTGGACCGACTTTTATCACTAGGAAGGTCACGCGTGCTGTGGTGCGCA 7324 Query 161553 TTAGTACAGGACTACAGGATTGTCTATACCTAGGTAATCTAAACTCAAGACGAGATTGGG 161612 | || | ||||| || | ||||| | | || ||| || | | |||| || |||| Sbjct 7325 TCCGTGCCGGACTCGAGAAGTGTCTTTTTGTGGGCAATTTAGATGCTCGACGCGACTGGG 7384 Query 161613 GTCATGCTGAAGACTATGTGGAGGCTATGTGGTTGATGTTACAACAGGAAACTCCTGATG 161672 ||||||| |||||||| ||| |||||| ||||| ||||| || || || || | Sbjct 7385 GTCATGCCCGCGACTATGTTGAGTGCATGTGGCGAATGTTGCAACACGATACACCAGAAG 7444 Query 161673 ACTATGT 161679 | | ||| Sbjct 7445 ATTTTGT 7451 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 729911041539920