Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20lateralis_20[genbank_20GCA_5F000333055.2_202015-10- 27] 5,541 sequences; 46,077,030 total letters Query= NC_001348.1 Length=124884 Score E Sequences producing significant alignments: (Bits) Value seq382 107 2e-18 >seq382 Length=26401 Score = 107 bits (118), Expect = 2e-18 Identities = 155/216 (72%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 18972 ATGGTACTACCTCCATGTCACACGTTATGTCAGTTTTACGTTGCAAACGGTGAATTATCC 19031 |||| ||| || || ||||||| ||| || ||||| ||||| || |||| ||||| || Sbjct 6336 ATGGCACTGCCGCCGTGTCACATGTTCTGCCAGTTCTACGTGGCGGACGGCGAATTGTCG 6277 Query 19032 TGCCAAGTATACCAGAGATCGGGGGATATGGGCCTTGGGGTACCGTTCAACATTGCTGGA 19091 || || | |||||| | |||| |||||||||||||| || ||||| |||||||| | Sbjct 6276 TGTCAGATGTACCAGCGCTCGGCCGATATGGGCCTTGGTGTGCCGTTTAACATTGCAAGC 6217 Query 19092 TATGCACTTCTTAC-CTACATAGTAGCGCATGTTACAGGACTTAAAACCGGAGATTTAAT 19150 || || | || || | || |||| || || || |||| || ||| | || || || || Sbjct 6216 TACGCGTTGCTCACGCGAC-TAGTGGCACAAGTGGCAGGGCTGAAACCTGGTGAATTTAT 6158 Query 19151 TCATACAATGGGGGATGCACATATTTACTTGAATCA 19186 ||| || || || || ||| | || |||| || Sbjct 6157 TCACGTTATCGGTGACGCGCATGTGTATCTGAACCA 6122 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399477021120345