Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20lateralis_20[genbank_20GCA_5F000333055.2_202015-10- 27] 5,541 sequences; 46,077,030 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq391 212 1e-49 seq379 176 8e-39 seq138 140 6e-28 seq33 131 3e-25 seq470 125 1e-23 seq738 123 5e-23 seq4719 118 2e-21 seq369 104 4e-17 seq2860 95.1 2e-14 seq60 93.3 8e-14 >seq391 Length=25901 Score = 212 bits (234), Expect = 1e-49 Identities = 618/938 (66%), Gaps = 29/938 (3%) Strand=Plus/Plus Query 9893 TTAGAAGTCTGCGTCAATTGCAAACACGTTGTCGTCGGCATTCATGACGCCC------GC 9946 ||||||||||||||| | | ||||| | ||| |||| | ||| ||| || Sbjct 369 TTAGAAGTCTGCGTCCAGAGTGAACACCTGGTCCGCGGC---CGCGACACCCACACCAGC 425 Query 9947 CTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTCGAGGGAAATGAG 10006 ||| |||||| || || ||| |||||||||| |||||||| || || || | Sbjct 426 CTTGGAGTACTCGCCCACGCGCTTCTCAAAGAAGTTGGTCTTGCCCTGTAGCGAGATCAT 485 Query 10007 CTCCATGAAGTCAAAGGGGTTCTCGGCGCCAAACTGCTTGGGGTAACCGAGTGCTGTGAA 10066 ||||| |||| || ||||||| || | ||||| ||| || | || Sbjct 486 GTCCATCCAGTCGAACGGGTTCTTCACGTTGTAGATCTTGGACGCACCCAGCGAGTACAA 545 Query 10067 AATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAGTTCATGCCAATCAT 10126 | |||||| ||||||||||||||||| |||| ||| || | ||||||||||| |||| Sbjct 546 CAGGCGGTCGGCCACGAACTCGATGTATTGGCACATGAGCGCAGAGTTCATGCCGATCA- 604 Query 10127 GCGGCA-GGGGATGGCGTCGCAAATGAAGTCCTTTTCGTTGGCGACCGCTTCCTCGACGA 10185 || || ||||| || || | | ||| || | || | | || || || |||| Sbjct 605 GCTCCACGGGGAGGGAATCACTCACGAACTCGTGCTCAATCACCACAGCGTCACGCACGA 664 Query 10186 TGCTCTTTACCACG--TCAAGGGACAGCTTGTTCTCGAGCTTCGAATACAGGAGCTCTCC 10243 | | | | | || || || |||||||||| | | |||||| |||| ||| | Sbjct 665 T-CGCGTGCACGCGGCTCTCCGG-CAGCTTGTTCACCAACTTCGAGTACATGAGGCACGC 722 Query 10244 AAACTGCTGGTGGAGGCCCTCGTCGCGGCTGATGAACTCGTTGGACAAACCCAGACCGGG 10303 || | | ||| | ||||||||| |||||||||| |||||| || || | |||||| || Sbjct 723 GAAGTCCGTGTGCATGCCCTCGTCCCGGCTGATGAGCTCGTTCGAGAAGCTCAGACCAGG 782 Query 10304 CATGAGCCCCCGGTTGCGCAGCCAGAAAATGGCGCAGAACGACCCGGAGAACAGAAGACC 10363 |||||| || || || |||||||| |||| |||||| || || ||||| | || || Sbjct 783 CATGAGGCCGCGCTTTTTGAGCCAGAAGATGGAGCAGAAGGAGCCCGAGAAGAAAATGCC 842 Query 10364 CTCCACGCACACCCAGGCGACGAGGCGCTCTGCGAAGGAGCGGTCGCGCGA-----AAAG 10418 ||||||| | | || | |||||||| | | |||| | | ||||| | | Sbjct 843 CTCCACGGCAGCGAACGCCAGCAGGCGCTCCGGGTAGGAC--GACACGCGAGGGTCACAC 900 Query 10419 TATTTCGAG-GCCCACGCTGCCTTCTTTCCCACGGCAGGGATCGTCTCGATAGCCTCGAA 10477 | || ||| ||||| |||||||| ||||| |||||||||||||| | | || | Sbjct 901 CACTT-GAGCGCCCAGCGGGCCTTCTTCTCCACGCACGGGATCGTCTCGAT-GGCACGCA 958 Query 10478 G-AGCTTGTTACGCTCGGTCTCGTCCTCAATAAGAGCATCAAGGAGCAGGGAGTATTGCT 10536 | || | | ||| |||||| || | || | ||||| ||||| || Sbjct 959 GCAGGTGATCCTTCTCCACGGCGTCCTTGATGTATGTGTCGATCAGCAGCGAGTACACCT 1018 Query 10537 CGCTGTGGACGCTCTCATTGTACCCCTGGTAAGCGTAGAACATACGTGCCGAGGGGTCCG 10596 | ||||| | |||| | |||| | ||||||| || ||| || || Sbjct 1019 CCGAGTGGATGTTCTCGATAGCGATCTGGAAGCCGTAGAAGCAGCGAGCCTCCGGCACCT 1078 Query 10597 TGACTTCCTCGGCAAAGTTGTTGTTCAGGTTCTCCATCACCATGCCATCGCTGCCTGCAA 10656 || || | | ||||| | ||||||||| |||| ||||| |||||| | || | Sbjct 1079 GCACCTCATTGCTGAAGTTCATCGCCAGGTTCTCGTTCACGATGCCGTCGCTGGCAGCGA 1138 Query 10657 AGAAGCCGAGGATGTGCTTGATGAAGTGGCGCTCATCATCGTTCAGTTTTTCACGCCAGT 10716 |||| | || | ||||||||||||||| ||||| | ||| |||| || | ||||| Sbjct 1139 AGAACGCCAGCACGTGCTTGATGAAGTGACGCTCGTTGTCGGTCAGGTT---CCCCCAGT 1195 Query 10717 CTACCACATCCTGGTTGAGCTGGACCTCCTCCACGGTCCAGAAAGTGGCAACGGCCTTCT 10776 | || || || || | | |||||| | |||||||| | || | ||||||| Sbjct 1196 CCTTCAGGTCGTGCACCAGGTCCAGCTCCTCGGCCGTCCAGAACGACGCCTCCGCCTTCT 1255 Query 10777 TGTACATCTGGAAAATGTCGGGGTACCGGATGGGGAAC 10814 |||||||||| | | |||| | | | |||| |||||| Sbjct 1256 TGTACATCTGCCACACGTCGTGCTCCTGGATCGGGAAC 1293 >seq379 Length=29123 Score = 176 bits (194), Expect = 8e-39 Identities = 449/673 (67%), Gaps = 34/673 (5%) Strand=Plus/Plus Query 224981 CGCCACTGGATGTACTGGTTGGGGGTCATGTCCAGGTGGTTCTCAATATGGTGGAAAGCA 225040 |||||||||||||||||||||| |||| ||| ||||| ||| || ||||||||||| Sbjct 18017 CGCCACTGGATGTACTGGTTGGCGGTCTCGTCGAGGTGAGACTCGATGTGGTGGAAAGCG 18076 Query 225041 TGCTGGGCTACGTACGCCATGCGCATGTTGGGATGCTTCCACACAGAGCCCCGAGTCGGT 225100 || ||||| ||||| || | |||||| || ||||||||||| ||| | || || Sbjct 18077 TGTTGGGCCACGTAGGCGAAACGCATGGAAGGGTGCTTCCACACTTGGCCACTCGTGGGC 18136 Query 225101 TGTGCCTCGCCGGTGAGGACCTTGATGAGCGTAGTCTTGCCCGCACCATTGGGGCCAATC 225160 | |||| || || || | |||||| | |||| ||| || ||||| |||||||||| | Sbjct 18137 TCAACCTCACCCGTCAGCATCTTGATCATGGTAGACTTACCGGCACCGTTGGGGCCAAGC 18196 Query 225161 ACGCCAATCCGGGATGACATTGC-AAC----CTGCGA-GTTCACGTTGCT-GAAGATCTC 225213 ||| | || ||| |||| || || ||| | ||| |||| | || | || Sbjct 18197 ACGGCGATACGGCTCGACAAAGCGCACGTCACTGAAATGTT---GTTGATCGACGGCTTC 18253 Query 225214 AGG--GCCAG---TTTGGTAAGCAAAGGCCACGCCACGCAGCTTCATGATGGCACGGTCC 225268 || ||||| ||||| | | || || || | ||||||| || Sbjct 18254 GGGGTGCCAGGGTACTGGTACGAACAG--TTCGTCAAAC----GAATGATGGGCTTACCC 18307 Query 225269 TTGGAAGTAATACCCTCCAGGAACCCGGGCTCGGGGAACTCCCACTTGGTCACCGCGTC- 225327 ||| | || | | ||||| || ||||| |||||| ||| |||| ||| Sbjct 18308 TTGTTCTTGATGTCAGCAAGGAAACCAGGCTCCGGGAACGTGAACT---TCACGTTGTCA 18364 Query 225328 --CTTCAGGTCGTAGTAAGATGCAGCCTCGGGTCGCTTTGCCACGAAAGCAGACAGGTTT 225385 || ||| |||||||| | ||||| || || ||||||||||||| ||||| Sbjct 18365 GACTCCAGCTCGTAGTAGGCCTTGGCCTCAGGCTTCTGCTCCACGAAAGCAGAAAGGTTG 18424 Query 225386 CCGAGGTGCTTCGTGAGCTT--GAGGTTCTTCTCGTAATGAACAATTGCCGAGCACACTG 225443 || || || | ||||| ||| ||||||| |||| || | || || | Sbjct 18425 CCCTTGTAGATCTTCAGCTTACGAG-----TCTCGTAGTGAATGATGTTGGTACAGACCG 18479 Query 225444 CGTCAAGGAAGCCAGAGTCGTGGGACACAATGATGGACGACACGTTCGTCAGGCCCTTGA 225503 ||| ||||| ||||||||||| ||||| |||||| || |||||||| ||||| | | | Sbjct 18480 TGTCGAGGAAACCAGAGTCGTGCGACACCATGATGCTCGTCACGTTCGGCAGGCTCGTCA 18539 Query 225504 GGTGCGTGATGAGCCATGCCACGTTGCTGACGTCCATGTGGTTTGTAGGTTCGTCCAGAA 225563 ||| | ||||| || ||||| | || |||| |||||| || || || || |||| Sbjct 18540 GGTAGTTCTCCAGCCAGGCGACGTTCTTAACATCCAAGTGGTTCGTCGGCTCATCAAGAA 18599 Query 225564 GCAGGATGTCAGCATCAATGAGGATGGCGCGCGTGAGAGACAGCTTCATTTTCCAGCCCC 225623 ||| |||||| || | || ||||| || | || || ||||| ||||| || | Sbjct 18600 GCAAGATGTCGGCCTTCTGCAGCATGGCACGAGCAAGTTCAAGTTTCATCTTCCAACCAC 18659 Query 225624 CGGACAGGGAGCC 225636 | || |||| ||| Sbjct 18660 CCGAAAGGGTGCC 18672 Score = 116 bits (128), Expect = 7e-21 Identities = 144/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 224449 GTGAGAAATAACTACTACACCGCCGCCGAATGACTCAAGGGCGGATGAAAGCGCGCCAAG 224508 ||| | ||| | || ||||| ||| ||| || | ||| || | ||| || ||||| Sbjct 17473 GTGGGTAATCATGACCACACCACCGTTGAAGTCCTTGATGGCCGAAGCAAGGGCTCCAAG 17532 Query 224509 CGACTCGCGGTCAAGGAAGTTCGTCGGCTCATCCAGGATGATAACGTGGGGGCACTGCCA 224568 ||| |||||||||||| ||||||| |||||||| || | | | ||| ||| | |||| Sbjct 17533 CGAGTCGCGGTCAAGGTAGTTCGTGGGCTCATCAAGCACCAGGATGTGAGGGTTCAGCCA 17592 Query 224569 CAGGGCTGCACCAACCACCAGCTTCACCTTCTGACCGCCAGAGAGGCCGCGGATCCGCGA 224628 || ||| || || | ||| | ||||||||||||||| || || || || || || ||||| Sbjct 17593 CATGGCAGCTCCCAGCACGACCTTCACCTTCTGACCACCGGACAGACCACGCATGCGCGA 17652 Query 224629 GTGAGTCGTGAATTCGG 224645 ||| || ||| |||| Sbjct 17653 GTGCGTACCGAACTCGG 17669 Score = 93.3 bits (102), Expect = 8e-14 Identities = 122/169 (72%), Gaps = 0/169 (0%) Strand=Plus/Plus Query 225817 GGGGAAGCCCTCCAGCTGGCCATTTGCAATCGCACGGAGCAGGGTACTCTTGCCCGCGCC 225876 |||||||||||| ||||| || || | || || || | ||| || ||| || || Sbjct 18850 GGGGAAGCCCTCGAGCTGACCGTTGGAGATAGCGCGCATCAGCGTCGACTTACCACAACC 18909 Query 225877 GTTGGGACCGATGAGGCCGTAATGATTCCCGCGCTTGATGTTGAGGCGCGTGGAGTTCAG 225936 |||||| ||| || |||||| | | || ||||| | | ||||| | | |||||| Sbjct 18910 GTTGGGGCCGCACAGACCGTAACGGTGGCCACGCTTCAGGCGAAGGCGGGCGTTGTTCAG 18969 Query 225937 GAGGATCTTGCCACCATAGGCAAGGGAGAACTCGCAATCGCACAGGTCC 225985 || ||| | ||||||||||| || ||||||||||| | ||||| |||| Sbjct 18970 CAGAATCATACCACCATAGGCGAGCGAGAACTCGCAGTTGCACAAGTCC 19018 >seq138 Length=77892 Score = 140 bits (154), Expect = 6e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || ||||| || |||| |||| ||||||||| ||||| || |||||||| || ||| Sbjct 12964 CCACCGCGCAGACGCAGCACCAGGTGTAGCGTTGACTCCTTCTGGATGTTGTAGTCGCTC 13023 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || || || | |||||| || ||||| || || | || ||||| || || Sbjct 13024 AGCGTGCGACCGTCCTCAAGCTGCTTGCCAGCGAAAATCAGGCGCTGCTGGTCAGGCGGG 13083 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 |||||||||||||||||||| || ||| || ||||| | ||| | | || || Sbjct 13084 ATGCCTTCCTTGTCTTGAATTTTCTGCTTCACATTGTCGATCGAGTCCGACGGCTCCACG 13143 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||||| ||||| || || ||||| | ||||| ||||| |||||||| Sbjct 13144 TCCAAAGTGATCGTCTTGCCCGTCAAAGTCTTCACGAAGATCTGCAT 13190 Score = 136 bits (150), Expect = 7e-27 Identities = 170/233 (73%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 68229 TAATTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAA 68288 || || || || || || |||| |||| ||||||||| ||||| || |||||||| || Sbjct 12730 TAGTTACCGCCACGTAGACGCAGCACCAGGTGTAGCGTTGACTCCTTCTGGATGTTGTAG 12789 Query 68289 TCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCG 68348 ||| || || | || || || | |||||| || ||||| || || | || ||||| Sbjct 12790 TCGCTCAGCGTGCGACCGTCCTCAAGCTGCTTGCCAGCGAAAATCAGGCGCTGCTGGTCA 12849 Query 68349 GGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGAT 68408 || || |||||||||||||||||||| || ||| || ||||| | ||| | | Sbjct 12850 GGCGGGATGCCTTCCTTGTCTTGAATTTTCTGCTTCACATTGTCGATCGAGTCCGACGGC 12909 Query 68409 TCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || ||||| ||||| || || ||||| | ||||| ||||| |||||||| Sbjct 12910 TCCACGTCCAAAGTGATCGTCTTGCCCGTCAAAGTCTTCACGAAGATCTGCAT 12962 >seq33 Length=70540 Score = 131 bits (144), Expect = 3e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 68232 TTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCG 68291 ||||| |||||||| |||| |||| ||| || || ||||| || |||||||| || ||| Sbjct 19133 TTTCCACCGCGAAGACGCAGCACCAGGTGCAGGGTAGACTCCTTCTGGATGTTGTAGTCG 19192 Query 68292 GAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGT 68351 || || | || || || | |||||| |||||||| || | | || ||||| || Sbjct 19193 CTCAGCGTGCGACCGTCCTCCAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGGTCAGGA 19252 Query 68352 GGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCT 68411 || ||||||||||||||||| || || ||| ||| ||||| | ||| | | || Sbjct 19253 GGGATGCCTTCCTTGTCTTGGATTTTCTGCTTCACGTTGTCGATCGAGTCCGAAGGCTCC 19312 Query 68412 ACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || |||| ||||| || || ||||| | ||||| || || |||||||| Sbjct 19313 ACGTCCAGCGTGATCGTCTTCCCCGTCAACGTCTTCACAAAGATCTGCAT 19362 Score = 122 bits (134), Expect = 2e-22 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || ||||||| |||| ||| || || ||||| || |||||||| || ||| Sbjct 19364 CCACCACGCAGGCGCAGCACCAGGTGCAGGGTAGACTCCTTCTGGATGTTGTAGTCGCTC 19423 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || || || | |||||| |||||||| || | | || ||||| || || Sbjct 19424 AGCGTGCGACCGTCCTCCAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGGTCAGGAGGG 19483 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||||||||||||||| || || ||| ||| ||||| | ||| | | || || Sbjct 19484 ATGCCTTCCTTGTCTTGGATTTTCTGCTTCACGTTGTCGATCGAGTCCGAAGGCTCCACG 19543 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 |||| ||||| || || ||||| | ||||| || || |||||||| Sbjct 19544 TCCAGCGTGATCGTCTTCCCCGTCAACGTCTTCACAAAGATCTGCAT 19590 >seq470 Length=27097 Score = 125 bits (138), Expect = 1e-23 Identities = 257/376 (68%), Gaps = 16/376 (4%) Strand=Plus/Plus Query 173102 ATTGACACGATTATGCACTTTGCTGCGCAGACCCATGTGGACAACTCGTTCGGTAACTCG 173161 || ||||| || ||||||||||| || ||| |||| ||||||||||||||||| |||||| Sbjct 17243 ATCGACACCATCATGCACTTTGCAGCCCAGTCCCACGTGGACAACTCGTTCGGGAACTCG 17302 Query 173162 CTGGCATTTACCATGAACAACGTCTACGGGACCCACGTTCTCCTGGAATGCGCGAGGCTC 173221 | | || | || || ||| ||| || |||||||| || |||| || ||||| Sbjct 17303 ATCGAGTTCAGCAAGACCAATATCTTGGGCACCCACGTACTGTTGGAGGCTGCCAGGCTG 17362 Query 173222 TATGGCGGTGTCCAGCGGTTCATCAATGTGTCTACCGACGAAGTATACGGCGAGAGCAGT 173281 |||| |||| || |||||||| ||||| || ||||| || ||||| || | || Sbjct 17363 CATGG-GGTG--AAGAGGTTCATCCATGTGAGCACGGACGAGGTGTACGGAGAAGGGAGA 17419 Query 173282 CTGGGCAAAAAAGAAGGCCTCGATGA---ACACTCGT-CCCTCGAGCCAACAAACCCATA 173337 | | | || |||||| | || | || ||||| || ||||| || Sbjct 17420 CCCG-------ATTCCGCTCCGATGACGGAAGATCATGTGCTAGAGCCGACGAACCCGTA 17472 Query 173338 TGCAGCAGCCAAGGCTGGTGCCGAAATGAT-GGCACGTGCATATCACACATCGTACAAGC 173396 || || | || || || ||||| | | | || | | || ||| |||| | | Sbjct 17473 CGCGGCCACGAAAGCAGGGGCCGAGTTCCTCGTCAAG-ACGTACCACCGCTCGTTCGGCC 17531 Query 173397 TACCAGTCATCGTGACGCGCGGCAACAATGTGTATGGCCCGCATCAGTTCCCCGAAAAAA 173456 | || |||| | |||||| ||||||||||||| ||||||||||||| ||| || || Sbjct 17532 TGCCGAGCATCATCACGCGCAGCAACAATGTGTACGGCCCGCATCAGTACCCGGAGAAGC 17591 Query 173457 TGATCCCAAAATTTAT 173472 | ||||| || ||||| Sbjct 17592 TCATCCCCAAGTTTAT 17607 >seq738 Length=22000 Score = 123 bits (136), Expect = 5e-23 Identities = 142/191 (74%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333 || |||||||| || || ||||| || | || || || | |||||| || ||||| || Sbjct 12299 TTCTGGATGTTGTAGTCCGAGAGCGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATC 12240 Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393 || | || ||||| || || |||||||||||||| || || || |||||| || Sbjct 12239 AGGCGCTGCTGGTCAGGCGGGATGCCTTCCTTGTCCTGGATTTTCTGCTTGACATTGTCA 12180 Query 68394 ATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAAT 68453 ||| |||| | || || || |||| |||||||| |||||||| |||||||| || || Sbjct 12179 ATGCTGTCGGATGGCTCCACGTCCAGCGTGATGGTCTTTCCCGTCAGGGTCTTCACAAAG 12120 Query 68454 ATCTGCATTAT 68464 |||||||| || Sbjct 12119 ATCTGCATGAT 12109 >seq4719 Length=1107 Score = 118 bits (130), Expect = 2e-21 Identities = 207/296 (70%), Gaps = 4/296 (1%) Strand=Plus/Plus Query 268500 CGTACGGAGAACGTGGATGGAAGGGCGTCGTGATCTTT-TGAGGGATTTCTCGGACTTTG 268558 ||||||| || || || ||||| ||||| || || | || ||| | || | || ||| Sbjct 1 CGTACGGTGAGCGCGGGTGGAACGGCGT-GTCTTCATCCTGCGGGGTGGCTTGCACGTTG 59 Query 268559 CCAAAGAGCTCGGAGGTCGATGCTTGGTAGAACTTTGTTGTTTTTTCGAGACCGCAGATT 268618 || | | ||| || || ||||| |||||| |||| || ||||| || || | Sbjct 60 CCGTACAACTCACTCGTAGACGCTTGATAGAACCGCGTTGATTGCTCGAGTCCACACGTG 119 Query 268619 CGGATTGCCTCGAGCAAACGAAGAGTTCCCATGCCATCCACGTCCGCTGTATACTCCGGC 268678 || | | |||| ||| || | ||| | | || ||||| || || ||||| | | Sbjct 120 CGCAAACACGTTAGCAGACGCAGCGCTCCGAGCGCGTCGACGTCTGCCGTGTACTCGGCC 179 Query 268679 ATCTCGAATGACACCTGGACATGGCTCTGGGCGCCCAGGTTATAAACCTCATCCGGTTTG 268738 ||||| || || || | |||||| | |||||||||||| || || ||||| |||| | Sbjct 180 ATCTCAAACGAGACTTTAACATGGGACATGGCGCCCAGGTTGTACACTTCATCAGGTTGG 239 Query 268739 ACCTGCTGCACGATCT-TCACGAGGTTCGTTGAGTCGGTGAGGTCTCCGTAGTGCA 268793 || | |||||||| ||| ||||||| || ||| ||||||||||||||||||| Sbjct 240 ACACGTGCCACGATCTGACAC-AGGTTCGATGCGTCCGTGAGGTCTCCGTAGTGCA 294 >seq369 Length=26862 Score = 104 bits (114), Expect = 4e-17 Identities = 350/531 (66%), Gaps = 23/531 (4%) Strand=Plus/Plus Query 31701 CACACCGCCGTTTCGTCCGTAGAAGTGTATTCGACAATCTCG--GCACAAAGATTGCT-G 31757 ||||||||| || || | || ||||| || | ||||||| |||||| ||||| | Sbjct 5209 CACACCGCCACCTCATCGGGCGACGTGTACTCCATAATCTCGCAGCACAAG--TTGCTTG 5266 Query 31758 CCCGTGATGGTGCCGGCATTGGACTGCATGTTC---TTCACGTTCACGCTGTCCTTGTTG 31814 || ||| |||||| || |||| |||| || ||| | |||||||| Sbjct 5267 AGCG-GATCGTGCCGAGGTT---CTGCTGGTTCGACTTGCGGTTGGCCGCGTCCTTGTAC 5322 Query 31815 AGCACGTAAGGCATGCCCGTCTCGATCTGCGTGATGATCATCGCATTCCAGACATCGCGC 31874 |||| | | |||| ||| ||||| ||||||| | | || || ||| | | | Sbjct 5323 AGCATGAACGGCACGCCTGTCTCAATCTGCGCGTCCAGGATGGCGAACCACAGCTGCTGG 5382 Query 31875 GCTTTGA-CGACTTTCTTCGCACGCCCCTCGGACTCGTAGCGAAGATACAGGTCCTCGTA 31933 || |||| || ||| | ||| || ||||| |||||| ||||| |||| | Sbjct 5383 GCGTTGATCGTCTTGCG-CGCGCGTCCCTCCTTCTCGTACTTCTCGTACAGCGTCTCGAA 5441 Query 31934 CTCCTTGCCAAAGGCATCGGTTAGACCGGGACACTCCTTGGGGTCGAAGAGCGACCATGC 31993 ||| | ||| || ||| || ||||| ||| |||||| ||| || ||| Sbjct 5442 CTCGTCGCCCCAGCACTCGTAGAGTCCGGGGGCCTCGTTGGGGCAGAACAGGCTCCACTT 5501 Query 31994 GACATCGGCCTCTACTCGCTTCATGAACAGGTCGTTCAGCCACATCGCGTAAAACAGATT 32053 | ||| ||||| || |||||||||||||| ||| | ||||| |||||||||| | Sbjct 5502 GCCATTCGCCTCCACGCGCTTCATGAACAGATCGGGGACCCACAGAGCGTAAAACAAGTC 5561 Query 32054 CCTGGCGCGTTGGGTCTCCTCACCCTGGTTACGTCGGAGCAGCAGGAAGTCCATGATGTC 32113 | ||||| || ||| | ||| || || || ||| |||||| || | | ||| Sbjct 5562 GCGCGCGCGGTGCAGCTCGTTACCGTGATTCTTACGCAGCTCCAGGAACTCGAACACGTC 5621 Query 32114 GGGGTGGTGGGGCTCGAGGTACACGGCGAAAGATCCCTTGCG---GCGACCCCCCTGGTT 32170 || ||| ||||| ||||| | |||||| ||||| ||||| || || ||||||| Sbjct 5622 GGCGTGCCACGGCTCCAGGTAGATGGCGAACGATCCTTTGCGCTTGCCTCCGCCCTGGTC 5681 Query 32171 TGCGTATGCAGATGTCGTGTCGT---ACACCTTCAGCATGGGTACGATGCC 32218 | || || || | |||||||| | ||| |||||||||| | ||| || Sbjct 5682 CACATA-GC-GA-GCCGTGTCGTTGAAGACCCTCAGCATGGGGATGATCCC 5729 >seq2860 Length=3894 Score = 95.1 bits (104), Expect = 2e-14 Identities = 175/251 (70%), Gaps = 8/251 (3%) Strand=Plus/Plus Query 98786 CGATTTTGCCGGTGCCGACGACGCCGATGGTCCTGCCGGTCACCTCGTTGCCGACCAGGC 98845 |||| || || ||||| || |||||||||||| ||||| ||| ||| ||||| ||| | Sbjct 583 CGATCTTTCCCGTGCCCACAACGCCGATGGTCTTGCCGTGCACGTCGAAGCCGAGCAGAC 642 Query 98846 CCTCGAGCGAGTAGTTCCCGGTCTTGATGCGGGGGAGGACCAGC--TGGAGGTTGCGGCT 98903 || || | ||||| | || | | | || | || ||| |||| |||||| | Sbjct 643 CCGACAGACGGAAGTTCT-GCTCGCGC-GTGCGGTTGTACGAGCGGTGGATCTTGCGGTT 700 Query 98904 GAGCGCCATCATGTGGGTGAGGGCGAGCTCGGCCACGGACCGT--GGGGAATACGCGGGA 98961 |||| ||||||| | | |||| |||| ||||||| ||| || || ||||||||| Sbjct 701 CAGCGTCATCATGAGCGACGCGGCGTGCTCAGCCACGG--CGTACGGTGAGTACGCGGGA 758 Query 98962 ACGCGGTAGACCACGAGGCCGAGCTTCTTGGCGTGCTCGATGTCCAGGCGGTCAAACCCG 99021 |||||| || | | |||||||| ||||||| || || ||| | ||| || ||| Sbjct 759 ACGCGGGTCACGGCCAAGCCGAGCTCCTTGGCGACCTTGAGGTCGATCATGTCGAAGCCG 818 Query 99022 GCACACCGGAG 99032 || || || || Sbjct 819 GCGCAACGCAG 829 >seq60 Length=61089 Score = 93.3 bits (102), Expect = 8e-14 Identities = 96/126 (76%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 224498 AGCGCGCCAAGCGACTCGCGGTCAAGGAAGTTCGTCGGCTCATCCAGGATGATAACGTGG 224557 || |||||||| | ||||||| ||| |||||||||||||||||| | | | ||| Sbjct 3696 AGAGCGCCAAGTGCGGCGCGGTCCAGGTAGTTCGTCGGCTCATCCAACACCAGCAGGTGC 3637 Query 224558 GGGCACTGCCACAGGGCTGCACCAACCACCAGCTTCACCTTCTGACCGCCAGAGAGGCCG 224617 || | | ||||| || ||| | | || ||||||||||||||||| || || |||||| Sbjct 3636 GGACGGTTCCACATCGCAGCAGCGATGACAAGCTTCACCTTCTGACCACCCGACAGGCCG 3577 Query 224618 CGGATC 224623 |||||| Sbjct 3576 CGGATC 3571 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921558566128520