Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20lateralis_20[genbank_20GCA_5F000333055.2_202015-10- 27] 5,541 sequences; 46,077,030 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq1414 86.0 5e-11 >seq1414 Length=7664 Score = 86.0 bits (94), Expect = 5e-11 Identities = 103/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 432282 TTGAGAGGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAGCGTGTCGATATGTCT 432341 ||| |||| || |||||||||||| | || || | ||||| |||||||| ||| | || Sbjct 1399 TTGCGAGGCAAGGAAGGTCGTATTCGTGGTAACCTCATGGGTAAGCGTGTGGATTTCTCG 1458 Query 432342 GCACGTACAGTTATTACTTCTGATCCTAATATTGCTCTCAATGAAGTTGGTGTTCCTCTC 432401 |||||||| || |||||| |||| || || || | | || |||||||||| || | Sbjct 1459 GCACGTACCGTCATTACTGCTGACCCGAACATCGAAATTGATCAAGTTGGTGTCCCGCGG 1518 Query 432402 ATTATTGCGAAAAATCTTAC 432421 ||||||| || ||||| Sbjct 1519 TCGATTGCGATGAACCTTAC 1538 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740358360316266