Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20lateralis_20[genbank_20GCA_5F000333055.2_202015-10- 27] 5,541 sequences; 46,077,030 total letters Query= NC_028099.1 Length=122522 Score E Sequences producing significant alignments: (Bits) Value seq382 91.5 1e-13 >seq382 Length=26401 Score = 91.5 bits (100), Expect = 1e-13 Identities = 172/253 (68%), Gaps = 0/253 (0%) Strand=Plus/Plus Query 111691 CGGGTAAGCTGTAATTGTAAAGGCTGTATGTGATTTAAATAAACATGCGCATCTCCTATA 111750 || |||||||| ||| | ||||| | ||| || | ||| |||||||| || || ||| Sbjct 6092 CGCGTAAGCTGCTTTTGAAGAGGCTCAACGTGGTTCAGATACACATGCGCGTCACCGATA 6151 Query 111751 CAATGGATCAATTCCCAAGGCTCCAAACCAGTGATGTGTGCAATCATGTATGTGAGTAGA 111810 || || ||||| | ||| | || || | | ||||| | | ||||| | Sbjct 6152 ACGTGAATAAATTCACCAGGTTTCAGCCCTGCCACTTGTGCCACTAGTCGCGTGAGCAAC 6211 Query 111811 CTGTAACTAGCAATGTTAAATGGCACACCTAGGCCCATATCTCCCGATCTTTGATATAGC 111870 ||| || ||||||||||| |||||||| ||||||||||| |||| | || || | | Sbjct 6212 GCGTAGCTTGCAATGTTAAACGGCACACCAAGGCCCATATCGGCCGAGCGCTGGTACATC 6271 Query 111871 TGACATGATAGTTTATTTTGTGACACATAAAATTGACAAAGTACATGACAAGGAGGCAAT 111930 ||||| || | || | | ||| || || || || | | ||||| || |||| | Sbjct 6272 TGACACGACAATTCGCCGTCCGCCACGTAGAACTGGCAGAACATGTGACACGGCGGCAGT 6331 Query 111931 GCCATCCCATTCA 111943 |||||| |||||| Sbjct 6332 GCCATCTCATTCA 6344 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 391919131546183