Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20lateralis_20[genbank_20GCA_5F000500205.2_202016-07- 21] 9,039 sequences; 52,448,581 total letters Query= NC_001348.1 Length=124884 Score E Sequences producing significant alignments: (Bits) Value seq7165 107 2e-18 >seq7165 Length=36682 Score = 107 bits (118), Expect = 2e-18 Identities = 155/216 (72%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 18972 ATGGTACTACCTCCATGTCACACGTTATGTCAGTTTTACGTTGCAAACGGTGAATTATCC 19031 |||| ||| || || ||||||| ||| || ||||| ||||| || |||| ||||| || Sbjct 19838 ATGGCACTGCCGCCGTGTCACATGTTCTGCCAGTTCTACGTGGCGGACGGCGAATTGTCG 19897 Query 19032 TGCCAAGTATACCAGAGATCGGGGGATATGGGCCTTGGGGTACCGTTCAACATTGCTGGA 19091 || || | |||||| | |||| |||||||||||||| || ||||| |||||||| | Sbjct 19898 TGTCAGATGTACCAGCGCTCGGCCGATATGGGCCTTGGTGTGCCGTTTAACATTGCAAGC 19957 Query 19092 TATGCACTTCTTAC-CTACATAGTAGCGCATGTTACAGGACTTAAAACCGGAGATTTAAT 19150 || || | || || | || |||| || || || |||| || ||| | || || || || Sbjct 19958 TACGCGTTGCTCACGCGAC-TAGTGGCACAAGTGGCAGGGCTGAAACCTGGTGAATTTAT 20016 Query 19151 TCATACAATGGGGGATGCACATATTTACTTGAATCA 19186 ||| || || || || ||| | || |||| || Sbjct 20017 TCACGTTATCGGTGACGCGCATGTGTATCTGAACCA 20052 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399459989515755