Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20lateralis_20[genbank_20GCA_5F000500205.2_202016-07- 21] 9,039 sequences; 52,448,581 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq7165 199 5e-46 >seq7165 Length=36682 Score = 199 bits (220), Expect = 5e-46 Identities = 405/590 (69%), Gaps = 10/590 (2%) Strand=Plus/Minus Query 145684 AGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTGGATGAAGTCCCCG 145743 || ||||| |||||||| || || || |||||||| || | ||||| || || || || Sbjct 20064 AGAGGCTCAACGTGGTTCAGATACACATGCGCGTCACCGATAACGTGAATAAATTCACCA 20005 Query 145744 GGCTCGAGGCCCGTGAGGTGGGCGACCATGTAG-GTCAGCAGGGAGTAGCTGGCTATGTT 145802 || | || || | | || || || | || | || |||| | |||||| || ||||| Sbjct 20004 GGTTTCAGCCCTGCCACTTGTGCCACTA-GTCGCGTGAGCAACGCGTAGCTTGCAATGTT 19946 Query 145803 GAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCC 145862 || ||||| || || ||||| || ||||||||||||||| ||| || || | || || Sbjct 19945 AAACGGCACACCAAGGCCCATATCGGCCGAGCGCTGGTACATCTGACACGACAATTCGCC 19886 Query 145863 GCCCGCCACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTC 145922 | ||||||||||||||||||| | | ||| || |||||||| ||||| | ||| || Sbjct 19885 GTCCGCCACGTAGAACTGGCAGAACATGTGACACGGCGGCAGTGCCATCTCATTCAGATC 19826 Query 145923 CGCCGGGTTCCAGGCGGTGAGGACGAGCCTCCTGCTCTCGGGGTTCCTCTTGATCTCCCC 145982 || |||||||| || | | |||| || | | | |||||| | | || Sbjct 19825 AGCAGGGTTCCACGCAGACAACACGATCCGGCGGTCCATCGGGTTCGTACGCAGCTTATG 19766 Query 145983 TATCAGGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGA-GTCCACGT 146041 |||| || | ||||||||||| ||||| || |||||||| | || | |||| || Sbjct 19765 AATCACCTCAGTAAGCTGGTCCACTCCCTGTCCAGTGTAATCTG-CGTGCATGTCCGTGT 19707 Query 146042 ACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTC-C 146100 || ||| || || || | ||||||||| |||||||| || || || || || || | Sbjct 19706 ACTTGGCGCCAAAATGGCGCCACTGGAAGCCGTAGACCGGTCCGAGATCACCTACTTCGC 19647 Query 146101 CTGTGCCCCAGCC-CGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTT 146159 || | | || ||| | | || | ||||||||||| || |||||||||| | Sbjct 19646 GCGTCTGCAATCCTCGG--CTATCCAGATACTCCCGGGACCCATTCCCGTCCCAGATGTG 19589 Query 146160 GACGCCCCTC-GCGGAGAGCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCT 146218 | | || || || | ||| | | | |||| || ||||| ||||| ||||||| Sbjct 19588 AATGTCCTTCTGCTG-CAGCGTGTGCGCGCTCGTGTCGCCGCTGATAAACCACAGCAGCT 19530 Query 146219 CTTCGAGGACCCCCCTCCAGAAGACCCTCTTGGTGGTCAGCAGGGGGAAC 146268 | || || || | |||||| || | |||||| || ||||| |||||| Sbjct 19529 CCTCCGCCACGCCGCGCCAGAACACGCGCTTGGTCGTGAGCAGCGGGAAC 19480 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590010128697560