Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20lateralis_20[genbank_20GCA_5F000500205.2_202016-07- 21] 9,039 sequences; 52,448,581 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq7165 131 1e-25 >seq7165 Length=36682 Score = 131 bits (144), Expect = 1e-25 Identities = 307/461 (67%), Gaps = 2/461 (0%) Strand=Plus/Plus Query 20218 GGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATGTTGAC 20277 || ||| | || || || || || || || ||| | |||||||| || | || ||| Sbjct 19655 GGTGATCTCGGACCGGTCTACGGCTTCCAGTGGCGCCATTTTGGCGCCAAGTACACGGAC 19714 Query 20278 ATGAACACAAATTATTTTGGACAAGGAGTAGATCAA-TTACAAAATGTTATTAATTTAAT 20336 ||| || || |||| |||||| ||||| || || |||| | || ||| || | Sbjct 19715 ATGCACGCAGATTACACTGGACAGGGAGTGGACCAGCTTACTGAG-GTGATTCATAAGCT 19773 Query 20337 TAAAACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAGATGTGCC 20396 |||||||| | ||| | | || | || | || |||||| || ||| || Sbjct 19774 GCGTACGAACCCGATGGACCGCCGGATCGTGTTGTCTGCGTGGAACCCTGCTGATCTGAA 19833 Query 20397 TTTAATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTTGCTAATAATGAATT 20456 | ||||| |||| || ||||| ||| | ||||| || ||||| || | ||||| Sbjct 19834 TGAGATGGCACTGCCGCCGTGTCACATGTTCTGCCAGTTCTACGTGGCGGACGGCGAATT 19893 Query 20457 GTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAATATTGC 20516 ||||||||| ||||| || || || || |||||||| || ||||| || || || ||||| Sbjct 19894 GTCGTGTCAGATGTACCAGCGCTCGGCCGATATGGGCCTTGGTGTGCCGTTTAACATTGC 19953 Query 20517 AAGTTATGCGCTGCTTACGTATATGATTGCACATGTTACAGATTTAAAAACGGGTGACTT 20576 ||| || ||| |||| ||| | | ||||| || ||| | ||| | ||||| || Sbjct 19954 AAGCTACGCGTTGCTCACGCGACTAGTGGCACAAGTGGCAGGGCTGAAACCTGGTGAATT 20013 Query 20577 AGTCCACACCATAGGAGACGCGCATATTTACCTTAATCATATAGAACCTTTAAAATTACA 20636 | ||| || || ||||||||| | || || || || | || ||| | || || Sbjct 20014 TATTCACGTTATCGGTGACGCGCATGTGTATCTGAACCACGTTGAGCCTCTTCAAAAGCA 20073 Query 20637 GTTAACACGACAACCAAAACAATTCCCAACTCTTCGCATTA 20677 | | || || ||| | ||||||||| |||| ||||| Sbjct 20074 GCTTACGCGTTCACCGCGGCCATTCCCAACGCTTCACATTA 20114 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399140024767855