Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20lateralis_20[genbank_20GCA_5F000500205.2_202016-07- 21] 9,039 sequences; 52,448,581 total letters Query= NC_005261.2 Length=137821 Score E Sequences producing significant alignments: (Bits) Value seq6992 98.7 9e-16 >seq6992 Length=19155 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 9/227 (4%) Strand=Plus/Plus Query 99544 CGCACGGTGAGCGAGGTGTTGAGCAGCAGCACGCCGCGGCGCGCCCAGGCCTCCAGGCAG 99603 || || |||||| ||||||||||||||||| || |||| |||| ||| ||| Sbjct 12767 CGGACTGTGAGCACCGTGTTGAGCAGCAGCACTCCCTGGCGGCTCCAGCAGGACAGACAG 12826 Query 99604 CCGTGCTGCGGCCGCGGGGTCCCGGGGAAGTTCTTCTGCACGGCCGC---GTAGATGTTC 99660 |||||| || |||| | | || | | || | |||| | |||||||||| Sbjct 12827 CCGTGCGAGGGGCGCGAGATGCCCACGTCGCTCAT------GGCCTCCTTGTAGATGTTC 12880 Query 99661 TGGAGGCTGGGCGGGATCGGAACGCCGCGGTTCACGCTGAAGGCCAGGCCGTGGGCCTGC 99720 | |||||| ||||| ||| | |||| || |||| |||| ||| ||||| |||||| Sbjct 12881 TTGAGGCTCGGCGGCGGCGGGATGCCGTGGCGCACGGAGAAGCTCAGTCCGTGCGCCTGC 12940 Query 99721 CCGTGGCTGTGGTAGGGGTCCTGGCCCAGGATGACGACCTTGACGTC 99767 | | |||||| |||||||| ||||| || || ||||||| ||| Sbjct 12941 TGCGGTCCGTGGTACGGGTCCTGCCCCAGAATCACCACCTTGAGGTC 12987 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 440849383901640