Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20lateralis_20[genbank_20GCA_5F000500205.2_202016-07- 21] 9,039 sequences; 52,448,581 total letters Query= NC_006151.1 Length=143461 Score E Sequences producing significant alignments: (Bits) Value seq6992 98.7 9e-16 >seq6992 Length=19155 Score = 98.7 bits (108), Expect = 9e-16 Identities = 226/335 (67%), Gaps = 9/335 (3%) Strand=Plus/Plus Query 94088 CCCCAGAGCATGAACACCAGCTTGGGGCGGGTCTC-GCAGAGCCGCTGGACGACGGCGCG 94146 |||||||||| |||||| | |||| | | |||| || || | || ||||||| Sbjct 12659 CCCCAGAGCAGGAACACGACGTTGGAG-GCGTCTTTGCTGATCTTGGAGATGACGGCGTC 12717 Query 94147 CACGAGCCGCGCCCAGCCGAGCGGGGCGTGGGAGCCGGGGACCCCGCGCCGCACGGTCAG 94206 || | || |||||||| || ||| ||| || | || || || || || || Sbjct 12718 GGTGAACTGCTCCCAGCCGCGCTTTTTGTGCGAGTTGGCCTCGCCTCGACGGACTGTGAG 12777 Query 94207 CGTCGTGTTCAGCAGCAGCACCCCGCGGCGCGCCCAGGCCTCCAGGCAGCCGTGGGCGGG 94266 | |||||| ||||||||||| || |||| |||| ||| |||||||| | ||| Sbjct 12778 CACCGTGTTGAGCAGCAGCACTCCCTGGCGGCTCCAGCAGGACAGACAGCCGTGCGAGGG 12837 Query 94267 -CGCGGGCAGCGTCGGGTACGTCGCCCG-GACCGCCGCGAAGATGTTGGCCAGGCTCGGG 94324 |||| | || ||||||| | | || || | ||||||| |||||||| Sbjct 12838 GCGCGAGATGCCC-----ACGTCGCTCATGGCCTCCTTGTAGATGTTCTTGAGGCTCGGC 12892 Query 94325 GGGATCGGCACCCCGCGCCGGACGCTGAAGGCCAGCCCGTGGGCCTGGCCCGGCCCGTGG 94384 || ||| | ||| | || ||| |||| ||| ||||| ||||| ||| |||||| Sbjct 12893 GGCGGCGGGATGCCGTGGCGCACGGAGAAGCTCAGTCCGTGCGCCTGCTGCGGTCCGTGG 12952 Query 94385 TACGGGTCCTGGCCGATGATGACCACCTTGACGTC 94419 ||||||||||| || | || |||||||||| ||| Sbjct 12953 TACGGGTCCTGCCCCAGAATCACCACCTTGAGGTC 12987 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 458895344703240