Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20lateralis_20[genbank_20GCA_5F000500205.2_202016-07- 21] 9,039 sequences; 52,448,581 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq8697 84.2 2e-11 seq8320 84.2 2e-11 >seq8697 Length=2752 Score = 84.2 bits (92), Expect = 2e-11 Identities = 126/171 (74%), Gaps = 6/171 (4%) Strand=Plus/Plus Query 119645 GTACTCGCCCACACGTTTTTCaaaaaaaTTAGTCTTGCCCTCAAGAGATATGTTATTCAT 119704 |||||||||||| || || ||||| || || |||||||||| || || || | | ||| Sbjct 380 GTACTCGCCCACGCGCTTCTCAAAGAAGTTGGTCTTGCCCTGTAGCGAGATCATGTCCAT 439 Query 119705 AAACTCGAAAGGATT-TGCAGTGTTGAAATGCTTGT-CGTAGCCCAACTCGAACAACAGT 119762 | ||||| || || | || |||| | |||| || | |||| | | ||||||| Sbjct 440 CCAGTCGAACGGGTTCTTCAC-GTTGTAGATCTTGGACGCA-CCCAGCGAGTACAACAGG 497 Query 119763 CGATCTGCCACAAACTCGATGTATTCGCACATGGATTGC-GAATTCATGCC 119812 || || ||||| ||||||||||||| |||||| || || || |||||||| Sbjct 498 CGGTCGGCCACGAACTCGATGTATTGGCACAT-GAGCGCAGAGTTCATGCC 547 >seq8320 Length=26225 Score = 84.2 bits (92), Expect = 2e-11 Identities = 126/171 (74%), Gaps = 6/171 (4%) Strand=Plus/Plus Query 119645 GTACTCGCCCACACGTTTTTCaaaaaaaTTAGTCTTGCCCTCAAGAGATATGTTATTCAT 119704 |||||||||||| || || ||||| || || |||||||||| || || || | | ||| Sbjct 380 GTACTCGCCCACGCGCTTCTCAAAGAAGTTGGTCTTGCCCTGTAGCGAGATCATGTCCAT 439 Query 119705 AAACTCGAAAGGATT-TGCAGTGTTGAAATGCTTGT-CGTAGCCCAACTCGAACAACAGT 119762 | ||||| || || | || |||| | |||| || | |||| | | ||||||| Sbjct 440 CCAGTCGAACGGGTTCTTCAC-GTTGTAGATCTTGGACGCA-CCCAGCGAGTACAACAGG 497 Query 119763 CGATCTGCCACAAACTCGATGTATTCGCACATGGATTGC-GAATTCATGCC 119812 || || ||||| ||||||||||||| |||||| || || || |||||||| Sbjct 498 CGGTCGGCCACGAACTCGATGTATTGGCACAT-GAGCGCAGAGTTCATGCC 547 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478608317132080