Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20lateralis_20[genbank_20GCA_5F000500205.2_202016-07- 21] 9,039 sequences; 52,448,581 total letters Query= NC_028099.1 Length=122522 Score E Sequences producing significant alignments: (Bits) Value seq7165 91.5 1e-13 >seq7165 Length=36682 Score = 91.5 bits (100), Expect = 1e-13 Identities = 172/253 (68%), Gaps = 0/253 (0%) Strand=Plus/Minus Query 111691 CGGGTAAGCTGTAATTGTAAAGGCTGTATGTGATTTAAATAAACATGCGCATCTCCTATA 111750 || |||||||| ||| | ||||| | ||| || | ||| |||||||| || || ||| Sbjct 20082 CGCGTAAGCTGCTTTTGAAGAGGCTCAACGTGGTTCAGATACACATGCGCGTCACCGATA 20023 Query 111751 CAATGGATCAATTCCCAAGGCTCCAAACCAGTGATGTGTGCAATCATGTATGTGAGTAGA 111810 || || ||||| | ||| | || || | | ||||| | | ||||| | Sbjct 20022 ACGTGAATAAATTCACCAGGTTTCAGCCCTGCCACTTGTGCCACTAGTCGCGTGAGCAAC 19963 Query 111811 CTGTAACTAGCAATGTTAAATGGCACACCTAGGCCCATATCTCCCGATCTTTGATATAGC 111870 ||| || ||||||||||| |||||||| ||||||||||| |||| | || || | | Sbjct 19962 GCGTAGCTTGCAATGTTAAACGGCACACCAAGGCCCATATCGGCCGAGCGCTGGTACATC 19903 Query 111871 TGACATGATAGTTTATTTTGTGACACATAAAATTGACAAAGTACATGACAAGGAGGCAAT 111930 ||||| || | || | | ||| || || || || | | ||||| || |||| | Sbjct 19902 TGACACGACAATTCGCCGTCCGCCACGTAGAACTGGCAGAACATGTGACACGGCGGCAGT 19843 Query 111931 GCCATCCCATTCA 111943 |||||| |||||| Sbjct 19842 GCCATCTCATTCA 19830 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 391902422170357