Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20lateralis_20[genbank_20GCA_5F000500205.2_202016-07- 21] 9,039 sequences; 52,448,581 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq9025 149 5e-31 >seq9025 Length=46235 Score = 149 bits (164), Expect = 5e-31 Identities = 171/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || ||| |||| |||||| | || ||| | || ||||| ||||| Sbjct 13249 ATGCAGATCTTCGTGAAGACTTTGACGGGCAAGACGATCACTTTGGACGTGGAGCCGTCG 13190 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 |||||||| || | || || || |||||||||||||| |||||||| || || || || Sbjct 13189 GACTCGATCGACAATGTGAAGCAGAAAATTCAAGACAAGGAAGGCATCCCGCCTGACCAG 13130 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| | || | ||| ||||| || | || ||| || || | ||| |||||| Sbjct 13129 CAGCGCCTGATTTTCGCTGGCAAGCAGCTTGAGGACGGTCGCACGCTGAGCGACTACAAC 13070 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || |||||||| || |||| |||| ||||| |||| |||||||| Sbjct 13069 ATCCAGAAGGAGTCAACGCTACACCTGGTGCTGCGTCTGCGCGGTGGCAT 13020 Score = 136 bits (150), Expect = 3e-27 Identities = 167/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 ||||||||| || || || ||| |||| |||||| | || ||| | || ||||| ||||| Sbjct 13022 CATGCAGATCTTCGTGAAGACTTTGACGGGCAAGACGATCACTTTGGACGTGGAGCCGTC 12963 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 |||||||| || | || || || |||||||||||||| |||||||| || || || || Sbjct 12962 GGACTCGATCGACAATGTGAAGCAGAAAATTCAAGACAAGGAAGGCATCCCGCCTGACCA 12903 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 ||||| | || | ||| ||||| || | || ||| || || | ||| ||||| Sbjct 12902 GCAGCGCCTGATTTTCGCTGGCAAGCAGCTTGAGGACGGTCGCACGCTGAGCGACTACAA 12843 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 ||| || |||||||| || |||| |||| ||||| | || || || Sbjct 12842 CATCCAGAAGGAGTCAACGCTACACCTGGTGCTGCGTCTACGTGGCGG 12795 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434869259657280