Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20lateralis_20[genbank_20GCA_5F000500205.2_202016-07- 21] 9,039 sequences; 52,448,581 total letters Query= NC_029255.1 Length=129563 Score E Sequences producing significant alignments: (Bits) Value seq7165 107 2e-18 >seq7165 Length=36682 Score = 107 bits (118), Expect = 2e-18 Identities = 176/254 (69%), Gaps = 0/254 (0%) Strand=Plus/Minus Query 118468 AGTGGCTCAATGTGATTCATATAGACATGAGCATCCCCAATTGTATGTATGAATTCACCA 118527 || ||||||| ||| |||| ||| ||||| || || || || || || ||||||||| Sbjct 20064 AGAGGCTCAACGTGGTTCAGATACACATGCGCGTCACCGATAACGTGAATAAATTCACCA 20005 Query 118528 GGTGTAAGCCCTGTCAGGTGAGCAATCATGTATGTCAACAAACTGTAGCTGGCTACATTA 118587 ||| | ||||||| || || || | | || | ||| |||||| || | ||| Sbjct 20004 GGTTTCAGCCCTGCCACTTGTGCCACTAGTCGCGTGAGCAACGCGTAGCTTGCAATGTTA 19945 Query 118588 AAAGGAACACCCAGACCCATGTCTGCTGATCTCTGGTACAATTGGCAAGAGAGCTCCCCG 118647 || || ||||| || ||||| || || || | |||||||| || || || | || ||| Sbjct 19944 AACGGCACACCAAGGCCCATATCGGCCGAGCGCTGGTACATCTGACACGACAATTCGCCG 19885 Query 118648 TTTGCAACATAAAACTGACTTATGATGTGACATGGAGGCAGAACCATGGAACTCAGTTGG 118707 | || || || ||||| | | |||||||| || ||||| |||| | |||| | Sbjct 19884 TCCGCCACGTAGAACTGGCAGAACATGTGACACGGCGGCAGTGCCATCTCATTCAGATCA 19825 Query 118708 GCAGGATTCCAGGC 118721 ||||| ||||| || Sbjct 19824 GCAGGGTTCCACGC 19811 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414431140069996