Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20megakarya_20[genbank_20GCA_5F002215365.1_202017-07- 06] 24,039 sequences; 101,504,516 total letters Query= NC_001348.1 Length=124884 Score E Sequences producing significant alignments: (Bits) Value seq465 131 1e-25 >seq465 Length=22214 Score = 131 bits (144), Expect = 1e-25 Identities = 160/216 (74%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 18972 ATGGTACTACCTCCATGTCACACGTTATGTCAGTTTTACGTTGCAAACGGTGAATTATCC 19031 |||| || ||||| ||||||| ||| |||||||| ||||| || | || || || ||| Sbjct 6711 ATGGCGCTGCCTCCGTGTCACATGTTCTGTCAGTTCTACGTGGCTGATGGGGAGTTGTCC 6652 Query 19032 TGCCAAGTATACCAGAGATCGGGGGATATGGGCCTTGGGGTACCGTTCAACATTGCTGGA 19091 ||||| | |||||| | |||| ||||||||||| || || |||||||||||||| | Sbjct 6651 TGCCAGATGTACCAGCGCTCGGCCGATATGGGCCTCGGTGTTCCGTTCAACATTGCCAGC 6592 Query 19092 TATGCACTTCTTAC-CTACATAGTAGCGCATGTTACAGGACTTAAAACCGGAGATTTAAT 19150 || || | || || | || | || || || || ||||||| ||| | || || || || Sbjct 6591 TACGCTTTGCTGACACGAC-TGGTTGCCCAAGTAGCAGGACTAAAACCTGGCGAGTTCAT 6533 Query 19151 TCATACAATGGGGGATGCACATATTTACTTGAATCA 19186 ||| || || ||||||||| | |||||||| || Sbjct 6532 CCATGTTATCGGCGATGCACATGTGTACTTGAACCA 6497 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399386955190755