Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20megakarya_20[genbank_20GCA_5F002215365.1_202017-07- 06] 24,039 sequences; 101,504,516 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq465 192 7e-44 >seq465 Length=22214 Score = 192 bits (212), Expect = 7e-44 Identities = 303/426 (71%), Gaps = 6/426 (1%) Strand=Plus/Plus Query 145641 GAGCCTGGGAAAGGGCCGGGGGCTCCTGGTCAGCTGGAGCTTCAGGGGCTCCACGTGGTT 145700 |||| | || || ||||| || | | || || || || || || ||||||||||| Sbjct 6442 GAGCGTCGGGAACGGCCGTGGCGTACGCGTTAGTTGCTTCTGAAGCGGTTCCACGTGGTT 6501 Query 145701 GAGGTAGACGTGCGCGTCCCCCAGGACGTGGATGAAGTCCCCGGGCTCGAGGCCCGTGAG 145760 | ||| || || || || || | || |||||||| || || || | || || | | Sbjct 6502 CAAGTACACATGTGCATCGCCGATAACATGGATGAACTCGCCAGGTTTTAGTCCTGCTAC 6561 Query 145761 GTGGGCGACCATGTAG-GTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCC 145819 ||||| |||| || | ||||||| | ||||||||| |||||||| || || || || | Sbjct 6562 TTGGGCAACCA-GTCGTGTCAGCAAAGCGTAGCTGGCAATGTTGAACGGAACACCGAGGC 6620 Query 145820 CCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCCCGCCACGTAGAACT 145879 |||| || ||||||||||||||| ||||||||| | |||||| | ||||||||||||| Sbjct 6621 CCATATCGGCCGAGCGCTGGTACATCTGGCAGGACAACTCCCCATCAGCCACGTAGAACT 6680 Query 145880 GGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGGGTTCCAGGCGG 145939 | || | | ||| || || ||||| ||||| || ||||||||| |||||||| || | Sbjct 6681 GACAGAACATGTGACACGGAGGCAGCGCCATCTCGTTCAGGTCCGCAGGGTTCCACGCCG 6740 Query 145940 TGAGGACGAGCCTCCTG-CTCTCGGGGTTCCTCTTGATCTCCCCTATCAGGTCCCTGAGC 145998 | ||| | || |||| | || |||||| || | || |||| || ||| Sbjct 6741 ATAAGACAATCCGCCTGTCACT-TGGGTTCGTCCGCAGCTTGTGGATCACTTCAGCGAGT 6799 Query 145999 TGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGA-GTCCACGTACGCGGCCCCGAAGTG 146057 |||||||||||||| || ||| |||| | || | ||| |||| |||||| ||||| Sbjct 6800 TGGTCCACGCCCTGTCCAGTGTAGTCTG-CATGCATGTCTGTGTACTTGGCCCCAAAGTG 6858 Query 146058 CCTCCA 146063 | ||| Sbjct 6859 GCGCCA 6864 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589899489297560