Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20megakarya_20[genbank_20GCA_5F002215365.1_202017-07- 06] 24,039 sequences; 101,504,516 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq465 159 3e-34 >seq465 Length=22214 Score = 159 bits (176), Expect = 3e-34 Identities = 134/162 (83%), Gaps = 2/162 (1%) Strand=Plus/Plus Query 21018 GTCAGGAGGGCGTAGCTGGCGATGTTAAACGGGACCCCGAGGCCCATGTCGGCGGACCTC 21077 ||||| | ||||||||||| ||||| ||||| || ||||||||||| ||||| || | | Sbjct 6578 GTCAGCAAAGCGTAGCTGGCAATGTTGAACGGAACACCGAGGCCCATATCGGCCGAGCGC 6637 Query 21078 TGGTACAGCTGGCAGGACAGCTCCCCCCGAGCCACGTAAAACTGACACAAAACGTGACAA 21137 ||||||| ||||||||||| |||||| ||||||||| |||||||| || | |||||| Sbjct 6638 TGGTACATCTGGCAGGACAACTCCCCATCAGCCACGTAGAACTGACAGAACATGTGACAC 6697 Query 21138 GGAGGGAGAGCCATC-CGCGCGAGGTCCGCGGGGTTCCACGC 21178 ||||| || |||||| || | |||||||| ||||||||||| Sbjct 6698 GGAGGCAGCGCCATCTCGTTC-AGGTCCGCAGGGTTCCACGC 6738 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427650672192720