Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20megakarya_20[genbank_20GCA_5F002215365.1_202017-07- 06] 24,039 sequences; 101,504,516 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq1 84.2 2e-11 >seq1 Length=128069 Score = 84.2 bits (92), Expect = 2e-11 Identities = 114/154 (74%), Gaps = 4/154 (3%) Strand=Plus/Plus Query 22741 CGTCTCTTGGCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATT-TGCGGCCAT 22799 ||||| | ||||| ||||| || |||||| || | || || || || || ||| |||| Sbjct 111345 CGTCTGCTCGCCTTCGCGGCGGTGGAAGGCATCTTCTTCTCGGGCTCCTTCTGCT-CCAT 111403 Query 22800 ATTCTGGCTGAAGAAACGTTCGCTCATGCCAGGGTTGGCGTTT-TCCAACGAGTTGATTA 22858 |||||||| ||||| || |||||||| |||| |||| || |||||| | |||| Sbjct 111404 CTTCTGGCTCAAGAAGCGCGGTCTCATGCC-GGGTCTCAGTTTCTCGAACGAGCTCATTA 111462 Query 22859 GCCGTGACGAAGGTCTACACTGTGACTTTGCTTG 22892 |||||||||| || | ||| |||||||| || Sbjct 111463 GCCGTGACGAGGGCATGCACACGGACTTTGCCTG 111496 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356129232349717