Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20megakarya_20[genbank_20GCA_5F002215365.1_202017-07- 06] 24,039 sequences; 101,504,516 total letters Query= NC_005337.1 Length=134431 Score E Sequences producing significant alignments: (Bits) Value seq440 127 2e-24 >seq440 Length=22882 Score = 127 bits (140), Expect = 2e-24 Identities = 138/183 (75%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 5584 CTCGCAGATCAGCTGCGCTATTCGGTCGCCCGTCTTTACCTCGAAATCGTTGTGGCCGAA 5643 |||| ||| ||||| | | |||||||| ||| || |||||| | | || Sbjct 21677 CTCGAGGATGAGCTGTCCCACGCGGTCGCCGCGCTTGACGGGGAAATCCTCGCTCGCGTG 21736 Query 5644 GTTGAACAGCACCACGCCCACGTTGCCGCGGTAGTCGGCGTCTATCACGCCCGCGCCCAC 5703 ||||||||| | ||||||||||||||| |||||||||||||| || ||||| ||||| Sbjct 21737 GTTGAACAGGATCACGCCCACGTTGCCTCGGTAGTCGGCGTCGATGACGCCAGCGCCGGT 21796 Query 5704 GTCGATGAAGTGCTTGACCGCCAGGCCGGAGCGGGGAGCCACGCGGCCGTAGCACCCATC 5763 |||||||| | ||| | || ||||| ||||| || ||||||||| ||||||| || || Sbjct 21797 ATCGATGAATTTCTTCAGAGCGAGGCCAGAGCGAGGCGCCACGCGGGCGTAGCAGCCGTC 21856 Query 5764 GGG 5766 ||| Sbjct 21857 GGG 21859 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429928404677768