Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20megakarya_20[genbank_20GCA_5F002215365.1_202017-07- 06] 24,039 sequences; 101,504,516 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq465 116 3e-21 >seq465 Length=22214 Score = 116 bits (128), Expect = 3e-21 Identities = 115/149 (77%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 20276 TAGCTGGCAATGTTAAAAGGAACTCCCAAACCCATGTCTCCCGACCTCTGATACAGCTGA 20335 |||||||||||||| || ||||| || | ||||| || |||| | ||| |||| ||| Sbjct 6590 TAGCTGGCAATGTTGAACGGAACACCGAGGCCCATATCGGCCGAGCGCTGGTACATCTGG 6649 Query 20336 CAGGAAAGCTCACCGTCAGCTACATAAAATTGACATAACAAGTGACAGGGCGGAAGCGCC 20395 ||||| | ||| || ||||| || || || ||||| |||| |||||| || || |||||| Sbjct 6650 CAGGACAACTCCCCATCAGCCACGTAGAACTGACAGAACATGTGACACGGAGGCAGCGCC 6709 Query 20396 ATCAACGACAAGTCCGCCGGGTTCCACGC 20424 ||| || |||||| ||||||||||| Sbjct 6710 ATCTCGTTCAGGTCCGCAGGGTTCCACGC 6738 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441240172990760