Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20megakarya_20[genbank_20GCA_5F002215365.1_202017-07- 06] 24,039 sequences; 101,504,516 total letters Query= NC_011335.1 Length=119343 Score E Sequences producing significant alignments: (Bits) Value seq3332 87.8 1e-12 >seq3332 Length=7221 Score = 87.8 bits (96), Expect = 1e-12 Identities = 164/239 (69%), Gaps = 4/239 (2%) Strand=Plus/Minus Query 108343 GGGTTCGGTGTGACGGCCGGCGTCCATCGGATGTGGACCCACAAAGCCTACAAGGCCA-- 108400 ||| |||| | ||||| |||| ||| || | ||| | ||| | ||||||||||| Sbjct 2645 GGGCTCGGCATCACGGCGGGCGCCCACCGCCTATGGGCGCACCGCGGCTACAAGGCCAAG 2586 Query 108401 CCGCCCCGTTCAGGGTGTTCCTGGCGCTTTGCTTCTCGGTGGCAGGACAGAACACCATCC 108460 | ||| | | | |||||||| ||| ||| |||| |||| || |||||| Sbjct 2585 CTGCCAC--TGCGCGTGTTCCTCATGCTGTGCAACTCGATGGCCTTCGAGGGGACCATCT 2528 Query 108461 CGCAGTGGGTGCTCGATCACAGGGTTCACCACAAGTACTCTGACACGACGGCCGACCCAC 108520 ||||| || ||| ||| | || ||||||||| || ||||||||||| ||||| | Sbjct 2527 TCGAGTGGTCGCGCGACCACCGCGTGCACCACAAGGGATCGGACACGACGGCTGACCCGC 2468 Query 108521 ACAACGCCAACAGGGGGTTCTGGTTCTCGCACGTGGGATGGCTCATGATGACCAAGGAC 108579 ||||| | | | || ||| ||||| ||| |||| ||| ||||| || |||| || Sbjct 2467 ACAACTCGGAGCGCGGCCTCTTCTTCTCTCACATGGGCTGGGTCATGGTGCGCAAGCAC 2409 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381660949994616