Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20megakarya_20[genbank_20GCA_5F002215365.1_202017-07- 06] 24,039 sequences; 101,504,516 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq2671 116 6e-21 >seq2671 Length=8519 Score = 116 bits (128), Expect = 6e-21 Identities = 163/225 (72%), Gaps = 8/225 (4%) Strand=Plus/Minus Query 203840 TTGTCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCT---CAGATAGTACATG 203896 |||||||| |||||||| ||||||| |||| | || || || ||||||||| Sbjct 6731 TTGTCCACGGTGAACTGGATGGCGT---CGGCTTTCGGGCGTCCACGCATGTAGTACATG 6675 Query 203897 CCGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTG 203956 || ||||| || ||||||| ||| |||| | |||||||||| || ||||| | | Sbjct 6674 CCCGTCTTGAGTCCCTTCTTCCAGGCGTAAAAATGCATGGAAGTGAGCTTGCTGATCGTC 6615 Query 203957 GGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGC 204015 |||||||| ||||| ||||| || ||||| || ||| ||| | |||||| ||||| || Sbjct 6614 GGGTCGGCGATGTGGATGTTAAGCGACTGACTCTGGCAAATGTA-GGCGCCGCGATCAGC 6556 Query 204016 GGCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTT 204060 | || || | | | ||||||| ||||||||||| || || Sbjct 6555 TGACAGATCAAGTACTGCCTTCTGCTTGATCTCCCACACAGTTTT 6511 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 794916265801840