Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20megakarya_20[genbank_20GCA_5F002215365.1_202017-07- 06] 24,039 sequences; 101,504,516 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq7045 113 5e-20 >seq7045 Length=3816 Score = 113 bits (124), Expect = 5e-20 Identities = 308/467 (66%), Gaps = 10/467 (2%) Strand=Plus/Plus Query 37196 ACCTTCATCTCTACTTATCAATTCATTAGAAAAGGTTAATCCTGGCATTAAACCTCtttt 37255 |||||| || | ||| |||| ||||| || ||| | | || ||||| | |||| || Sbjct 2774 ACCTTCGTCACGACTGATCATCTCATTCGAGAAGCTGAGACCAGGCATGAGGCCTCGCTT 2833 Query 37256 tttAATCCAAAATATTGCTGCAAAA-GATCCAGAAAAGAAAATACCTTCAACTGCTGCAA 37314 || | ||| || || |||||| || || || |||||||| |||||||| |||| |||| Sbjct 2834 CTTGAGCCAGAAAAT-GCTGCAGAACGACCCCGAAAAGAAGATACCTTCCACTGAAGCAA 2892 Query 37315 ATGCTACAAGACGTGTACCGAAAGTTGAACTATAATCAGAAATC----CAtttttttGTC 37370 | || | | || ||| || | || | | | || ||||| || | Sbjct 2893 ACGCCAGCAATCGCT--CCGG--GTAGGACGACACACGCGGGTCGCACCATTTCAATGCC 2948 Query 37371 CAATCTGCCTTTAATTTAACACATTCAATTGTTTCAATTGCTTTTAAGAGAAAGtttttt 37430 || | || || || ||| || |||||| || || || | ||| ||||||| Sbjct 2949 CAGTTCGCTTTCTTTTGAACGCAGGGAATTGTCTCGATGGCACGCAGCAGATAGTTTTTC 3008 Query 37431 tCTTCACTATCTGTTATATAAGTATCAATTAGTAAACTATACATTTCAGAGTGAATATTT 37490 || || |||| | ||||| || ||||| || | || | ||| ||||| || || Sbjct 3009 TCCACAGTATCCTTGATATACGTGTCAATGAGCAGTGAGTAGACTTCGGAGTGGATGTTC 3068 Query 37491 TCAATAGCTATCTGAAAACCATAAAAACACCTAGCTTCAGATAATTGAACATCGTTAAAA 37550 ||||| || ||||| ||||| || || || | |||||||| | || || ||||| Sbjct 3069 TCAATGGCGATCTGGAAACCGTAGAAGCATCGAGCTTCAGGCACCTGCACTTCGTTGCTG 3128 Query 37551 AACCTCTTAGCTAAGTTTTCATTAACTATCCCATCACTAGCTGCAAAGAAAGCAAGAACA 37610 || || | || | |||||||| || ||||||||||| || || || || || || || Sbjct 3129 AAGTTCATGGCCAGATTTTCATTGACGATCCCATCACTGGCAGCGAAAAATGCGAGCACG 3188 Query 37611 TATTTTATAAAATGTCTTTCATCATTTGATAATTTTTTCCAATCATT 37657 | ||| || || || | |||| || | | ||| | |||||| || Sbjct 3189 TGTTTGATGAAGTGGCGCTCATTATCCGTGAGTTTCTCCCAATCTTT 3235 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592138816205560