Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20megakarya_20[genbank_20GCA_5F002215365.1_202017-07- 06] 24,039 sequences; 101,504,516 total letters Query= NC_019945.1 Length=132978 Score E Sequences producing significant alignments: (Bits) Value seq238 84.2 2e-11 >seq238 Length=29854 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 ||||| || || || || || | ||||||||||| |||||| ||| |||||| || Sbjct 21166 ATGCAGATTTTCGTCAAGACTCTTACGGGTAAAACTATTACCCTCGACGTGGAACCGTCG 21107 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | | | |||||||||| || ||||| || || | ||| || || Sbjct 21106 GACTCGATCGACAACGTCAAGCAAAAGATTCAAGACAAGGAAGGCATCCCCCCTGACCAG 21047 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 ||| |||| ||||| || ||||| ||| | || || | ||| || || || ||| Sbjct 21046 CAGCGACTCATCTTCGCTGGCAAGCAACTTGAGGACGGTCGCACTCTGAGTGACTACAAC 20987 Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGT 28762 ||||| || || || || |||||| |||| Sbjct 20986 ATTCAGAAGGAGTCGACCCTGCACCTGGT 20958 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425280166895781