Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20megakarya_20[genbank_20GCA_5F002215365.1_202017-07- 06] 24,039 sequences; 101,504,516 total letters Query= NC_025429.1 Length=156446 Score E Sequences producing significant alignments: (Bits) Value seq465 104 2e-17 >seq465 Length=22214 Score = 104 bits (114), Expect = 2e-17 Identities = 113/146 (77%), Gaps = 3/146 (2%) Strand=Plus/Minus Query 142570 GCGTGGAACCCTGCTGAAGTCGACGACATGGCACTTCCTCCGTGTCACATGATGTTCCAA 142629 |||||||||||||| || | |||| ||||| || ||||||||||||||| | | || Sbjct 6738 GCGTGGAACCCTGCGGACCTGAACGAGATGGCGCTGCCTCCGTGTCACATGTTCTGTCAG 6679 Query 142630 TTCCACGTCGACTCGAAGAAGCGTCTGTCATGCCAGCTGTATCAGCGTTCGGCAGACTGG 142689 ||| |||| | || || | | || |||| |||||| |||| ||||| ||||| || | Sbjct 6678 TTCTACGTGG-CT-GATGGGGAGT-TGTCCTGCCAGATGTACCAGCGCTCGGCCGATATG 6622 Query 142690 TTCCTCGGCGTTCCGTTCAACATTGC 142715 |||||| ||||||||||||||||| Sbjct 6621 GGCCTCGGTGTTCCGTTCAACATTGC 6596 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500348806246640