Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20megakarya_20[genbank_20GCA_5F002215365.1_202017-07- 06] 24,039 sequences; 101,504,516 total letters Query= NC_025963.1 Length=139981 Score E Sequences producing significant alignments: (Bits) Value seq440 93.3 4e-14 >seq440 Length=22882 Score = 93.3 bits (102), Expect = 4e-14 Identities = 128/179 (72%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 5340 CTCGCAGATGAGCTGCGCCACGCGGTCGCCTCGCCGCACCACGAAGGTCTCTTGGCCGAA 5399 |||| ||||||||| ||||||||||||| ||| || ||| ||| || Sbjct 21677 CTCGAGGATGAGCTGTCCCACGCGGTCGCCGCGCTTGACGGGGAAATCCTCGCTCGCGTG 21736 Query 5400 GTTGAAGAGCACCACTCCCAGGTTCCCTCGGAAGTCCGGGTCCACGACGCCCGCTCCCAC 5459 |||||| || | ||| |||| ||| |||||| |||| | ||| | |||||| || || Sbjct 21737 GTTGAACAGGATCACGCCCACGTTGCCTCGGTAGTCGGCGTCGATGACGCCAGCGCCGGT 21796 Query 5460 ATCCACGAAGTTGTTTACCGCGAGACCGGACCTCGGCGCCACGCGACCGTAGCAGCCGT 5518 ||| | ||| || || | ||||| || || | ||||||||||| |||||||||||| Sbjct 21797 ATCGATGAATTTCTTCAGAGCGAGGCCAGAGCGAGGCGCCACGCGGGCGTAGCAGCCGT 21855 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447676638332040