Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20megakarya_20[genbank_20GCA_5F002215365.1_202017-07- 06] 24,039 sequences; 101,504,516 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq465 197 2e-45 >seq465 Length=22214 Score = 197 bits (218), Expect = 2e-45 Identities = 281/387 (73%), Gaps = 14/387 (4%) Strand=Plus/Plus Query 146920 AGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCC 146979 || || ||||||||||| | ||| || || || || || | || | || || || Sbjct 6485 AGCGGTTCCACGTGGTTCAAGTACACATGTGCATCGCCGATAACATGGATGAACTCGCCA 6544 Query 146980 GGCTTAAGGCCGGTCACGTGGGCCACCATGTAG-GTGAGCAGCGAGTAGCTGGCTATGTT 147038 || || || || | || ||||| |||| || | || |||| | ||||||||| ||||| Sbjct 6545 GGTTTTAGTCCTGCTACTTGGGCAACCA-GTCGTGTCAGCAAAGCGTAGCTGGCAATGTT 6603 Query 147039 GAAGGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCC 147098 ||| || || || |||||||| || |||| | |||||||| |||||| || | |||||| Sbjct 6604 GAACGGAACACCGAGGCCCATATCGGCCGAGCGCTGGTACATCTGGCAGGACAACTCCCC 6663 Query 147099 GTCGGCCACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTC 147158 || |||||||| ||||| || | ||||| ||||| ||||||||||| || |||||| Sbjct 6664 ATCAGCCACGTAGAACTGACAGAACATGTGACACGGAGGCAGCGCCATCTCGTTCAGGTC 6723 Query 147159 CGCGGGGTTCCAGGCCGAGACCACCAGCCGCCTG-CTCTCGGGGTTCCTCTTAATCTCTT 147217 ||| |||||||| ||||| | || | ||||||| | || |||||| || | || | Sbjct 6724 CGCAGGGTTCCACGCCGATAAGACAATCCGCCTGTCACT-TGGGTTCGTCCGCAGCTTGT 6782 Query 147218 CGATAACCCACCTCAGC----TGGTCCACGCCCTGGCCCCCGTAGTTTGTCCCGCA-GTC 147272 ||| ||| ||||| |||||||||||||| || ||||| || | ||| ||| Sbjct 6783 GGAT----CACTTCAGCGAGTTGGTCCACGCCCTGTCCAGTGTAGTCTG-CATGCATGTC 6837 Query 147273 CACGTACCTGGCCCCAAAGTGCCTCCA 147299 |||| ||||||||||||| | ||| Sbjct 6838 TGTGTACTTGGCCCCAAAGTGGCGCCA 6864 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583312669149600