Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20megakarya_20[genbank_20GCA_5F002215365.1_202017-07- 06] 24,039 sequences; 101,504,516 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq2671 212 7e-50 seq238 163 3e-35 seq43 140 4e-28 SEQ15627 138 1e-27 seq321 138 1e-27 seq1 134 2e-26 seq1885 118 1e-21 seq7045 96.9 4e-15 seq8293 95.1 1e-14 >seq2671 Length=8519 Score = 212 bits (234), Expect = 7e-50 Identities = 1053/1650 (64%), Gaps = 44/1650 (3%) Strand=Plus/Minus Query 80036 GCGTCC--GCAGATAGTACATGCCCGTCTTGAGGCCCTTCTTCCAGCCGTACAGGTGCAT 80093 |||||| ||| |||||||||||||||||||| |||||||||||| |||| | ||||| Sbjct 6696 GCGTCCACGCATGTAGTACATGCCCGTCTTGAGTCCCTTCTTCCAGGCGTAAAAATGCAT 6637 Query 80094 AGAACTGAGCTTCGCAAGTGTGGGGTTCTCCATGAAGATGTTCAGAGACTGAGACTGACA 80153 ||| ||||||| | || |||| | ||| |||||| || |||||| ||| || Sbjct 6636 GGAAGTGAGCTTGCTGATCGTCGGGTCGGCGATGTGGATGTTAAGCGACTGACTCTGGCA 6577 Query 80154 GATGAAAGCCCCACGATCTGCCGCCATTTCAATAATTGACTTTTGTGGAATTTCCCATAC 80213 ||| | || || ||||| || | || |||| | || ||| || || ||||| || Sbjct 6576 AATGTAGGCGCCGCGATCAGCTGACAGATCAAGTACTGCCTTCTGCTTGATCTCCCACAC 6517 Query 80214 TGTACGATA---CACCTTACGAAGCTCCTCTGGAATGTCC---AGATTTTGCACACTGCC 80267 || ||| | ||||| | | | || |||||| || | || ||||| || Sbjct 6516 AGTTTTATACTTCTCCTTA--ATGAT-GTCAGGAATGACCTTGACCTTCTGCACCGAACC 6460 Query 80268 ACCGTCCTTTACAATTTGATTTTTCAATTCAGACGTCCAGACACCAAGCTTGTGCAGATC 80327 |||||| | | || || || | |||| ||||||| ||| | || || || Sbjct 6459 ACCGTCACTAAGGATCTGGTTGCGAACCTCAGGGGTCCAGATACCCAACTCAATGAGCTC 6400 Query 80328 TTTCACAAGGTGCTTGTTAATCATGACAAACTCTCCCGCGAGGGTGCGACGCAGATACAG 80387 |||| |||| |||||| | || || || || || | ||||| ||||| Sbjct 6399 GTTCATCAGGTACTTGTTGACGATCGTGAATTCGCCAGCCAACACACGACGATTATACAT 6340 Query 80388 GTTTGTAGTGTAAGGCTCAAATGCCTCGTTGTTTCCGAGGATCTGAGCCGTGCTCGCCGT 80447 ||| | ||||| ||||| | | ||||||||| || || |||||||| || ||| || Sbjct 6339 GTTCGACGTGTACGGCTCGATCGACTCGTTGTTGCCAAGAATCTGAGCAGTAGACGCAGT 6280 Query 80448 CGGCATCGGGCCGACCAACAGTGAATTCCGCAGGCCGTGCTTCTTGATATCCTC-----G 80502 |||||||| | | | || || || || | || || || | | || ||| Sbjct 6279 AGGCATCGGTGCAATTAGAAGCGAGTTGCGTACACCATGTTTGATCACATTCTCCTTCAA 6220 Query 80503 CGCAAATCTGACCAAAAATCAACCCCAACGCTGTGA--CCCCACATGTCGTGCTGCAAGA 80560 |||| | | || | | || | | | || | |||||||||||| || |||| Sbjct 6219 CGCACCCCAGGCCCACAGTCCA-GAAGATGGGGTAACGCCCCACATGTCGAATTGGAAGA 6161 Query 80561 TGCCCTCCGACGCCGGAGACCCCGCGAACGTCTCGTACGGGCCCTCCGTCTTGGCCAGCT 80620 |||| || || || ||| ||| ||||| ||||||||| |||||| | || Sbjct 6160 CACCCTTGCTAGCAGGGGAACCCTGGAAAGTCTCATACGGGCCCAATTCCTTGGCAATCT 6101 Query 80621 C---ACACGACTCCATAAGGGCCGCGTGATAAATGCACTCAAAGACGCCCTTGTTCACAC 80677 | ||| |||||| ||| |||| ||||| ||| |||| | |||||||| Sbjct 6100 CCATCGACGTCTCCAT---GGCAGCGTAGTAAATCGTCTCGAAGATGTTCTTGTTCAGCT 6044 Query 80678 CGCGCGC-CTGTGGGTCGTCGAACGACAAGCCCATCATCATGAACACGTCAGCCAGGCCC 80736 |||| || | | | || ||||||| || ||| | |||||| ||||||| || ||| Sbjct 6043 CGCGGGCGTTCTCGCTC-TCGAACGGGTAGTTCATTAGAATGAACGCGTCAGCGAGACCC 5985 Query 80737 TGAACGCCGATGGCGATCGGGCGGTGGCGCTTGTTCGA-TCGCTCGGCCTCCGGAATTGG 80795 || ||||| || | | |||||||||||| |||| || | || || || | || Sbjct 5984 TGTACGCCAATCCCCACAGGGCGGTGGCGCATGTTGGACTTGC-GAGCTTCTACCACCGG 5926 Query 80796 GTAAAAGTTATTATCGATGACGCGGTTCAGGTTGCGTGTAACAACCCGTGTAACATCATG 80855 ||| |||| || || || |||||| ||||| || || || || || || | Sbjct 5925 GTAGTAGTTGACGTCAATCACCTTGTTCAGATTGCGGGTCACCACTTTGGTCACCTCGTA 5866 Query 80856 AAGTTTCTGAAAGTCGAATTGGTTCCCCTTCACAAATGCCGGAAGGCTCAGGGACGCCAG 80915 ||||||||| ||| ||| | | | ||| || || ||| | ||||||| Sbjct 5865 CAGTTTCTGATAGTTGAACACGCCATCTTCCACGAACTTGGGCAGGGCAACAGACGCCAA 5806 Query 80916 ATTGCACACGGCCACCTCTTCAGCATCTGTAAACTCGACGATTTCCGTGCACAAATTAGA 80975 |||||||| ||||| || || | | || |||| | | || |||||| || Sbjct 5805 GTTGCACACCGCCACTTCATCTGGAGACGTGTACTCCATCACCTCGCAGCACAAGTTGCT 5746 Query 80976 AGACTTAATTGTACCCAGGTTTTTCTGGTTTGACTTGGCGTTGCAAGCGTCCTTGTAGCA 81035 || ||| || ||||| || | |||||| |||||| |||| ||||| ||||| Sbjct 5745 GGAGCGAATCGTGCCCAGATTCTGCTGGTTCGACTTGCGGTTGGCCGCGTCTTTGTAAAG 5686 Query 81036 CATGTACGGGGTACCGGTCTCGACCTGTGACTTGAGGATGGCGTCCCAAATCTCGCGCGC 81095 |||| |||| || || || | ||| | | | |||||| ||| | | |||| Sbjct 5685 CATGAACGGCACTCCTGTTTCAATCTGAGCGTCCAAGATGGCAAACCACAGTTGCTGCGC 5626 Query 81096 CTTGACCACCTTGCG-GAATTTGCCTTCGGCCACATACTTGGCGTA-AGCTTCGTCGAAC 81153 |||| ||||| | | | || || | |||| |||| ||| | || ||| Sbjct 5625 ATTGATGGTTTTGCGTGCACGT-CCCTCCTTTTCGTACTGTTCGTAGAGCGT-TTCAAAC 5568 Query 81154 TTGGCACCGTGAAGTTCAGTGAGGTCTGGGCAC-TCGTTAGGGCACATCAGGTGCCAGTC 81212 | | | || || || | | | || | || || ||||| | || ||| | Sbjct 5567 TCGTCTCCCCAGCACTC-GTAAAGACCCGGAGCTTCATTGGGGCAGAACAAACTCCACTT 5509 Query 81213 GGTGTCGTTCTCTACAGCCTTCATGAAAGCGTCAGGGATCCAGAGGGCGGTGAACAGGTC 81272 | | | ||| || ||||||||| ||||||| ||| || || ||||| ||| Sbjct 5508 GCCATTGGCCTCCACCCTCTTCATGAACAGATCAGGGACCCATAGCGCATAGAACAAGTC 5449 Query 81273 GCGGCAGCGCGCCTCCTCATCACCCTGGTTGAGGCGCAACTCGAGAAAGTCCATGATGTC 81332 ||| || | ||| | || ||||| ||||| || || || || | | ||| Sbjct 5448 GCGCGCTCGATGCAACTCGTTGCCGTGGTTCTTGCGCAGGTCCAGGAACTCGAACACGTC 5389 Query 81333 CGCATGCCATGGCTCCAGATACACGGCGATCGACCCCTTGCG---ACGGCCACCCTGGTT 81389 || ||||| || |||| |||||| |||| ||| || ||||| | || ||||||| Sbjct 5388 TGCGTGCCACGGTTCCAAATACACAGCGAACGAGCCTTTGCGTTTGCCTCCGCCCTGGTC 5329 Query 81390 GACGTAACGGGCAGTCGCGTTAAATACACGCAACATAGGGATGATACCATCTGACTGACC 81449 ||||| || || || |||| ||||| |||| ||| |||||||| || | ||| || Sbjct 5328 CACGTAGCGCGCCGTGTCGTTGAATACGCGCAGCATGGGGATGATGCCGTTGGACGAGCC 5269 Query 81450 GTTCGTACCCACGATACGCGACCCCTTG---GCGCGCACCTTGCTGATTGAAAGACCGAT 81506 ||| || || ||| | | | | ||| || || | ||| || | ||||| Sbjct 5268 GTTGGT-GCCGCGA-ATG-TAGCTGTTGGTAGCTCGGATGTTGTGCATGCTGATGCCGAT 5212 Query 81507 GCCACCTGACCACTTTGAAATCTGAGCACACCGGTTCATGGTCTCATAAATTCCCTCGAT 81566 ||| |||| |||||| || || || ||| | || | || || || ||||||||||| Sbjct 5211 GCCTCCTGCCCACTTGGAGATGCACGCGCACTGCTTGAGCGTGTCGTAGATTCCCTCGAT 5152 Query 81567 GCTATCTTTTTTCATGTCAAGCAAGAAACAGCTTGACATCTGAGGGCTTTTTGAGCCGGC 81626 | || | || |||| | |||| ||| || |||| ||| || | | |||||| Sbjct 5151 GGAGTCGTCTTGCATGGCTAGCAGGAAGCACGACGACAACTGCGGACGCGGCGTGCCGGC 5092 Query 81627 ATTGAACAGTGTTGGGGTCGCGTGAATGAA 81656 || ||||| || || || || || |||| Sbjct 5091 GTTAAACAGCGTGGGCGTGGCATGCGTGAA 5062 >seq238 Length=29854 Score = 163 bits (180), Expect = 3e-35 Identities = 175/229 (76%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || ||||| ||||| | ||||||||||| || ||||| || || ||| | Sbjct 20938 ATGCAGATTTTTGTGAAGACATTGACCGGCAAGACGATCACTCTGGACGTGGAGCCGTCG 20879 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || || | ||| | ||| ||||||||||||||||| || || ||||| |||||| Sbjct 20878 GACTCAATCGACAATGTTAAGCAGAAAATTCAGGACAAGGAAGGCATCCCTCCTGACCAG 20819 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAA 27584 |||||||| || |||||||||||||| |||||||||| ||||| || ||| ||||| || Sbjct 20818 CAGCGTCTCATCTTTGCTGGTAAGCAGCTCGAGGATGGCCGTACGCTGAGC-GACTACAA 20760 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633 |||| ||||| || || || || || || | ||||||||||| ||| Sbjct 20759 CATCCAGAAGGAGTCGACCCTGCACCTGGTGCTTCGTCTTCGCGGCGGA 20711 Score = 147 bits (162), Expect = 2e-30 Identities = 171/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||| ||||| || ||||||||||| || || || || || ||| | Sbjct 21622 ATGCAGATCTTTGTGAAGACCCTCACCGGCAAGACGATCACGCTCGACGTGGAGCCGTCG 21563 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 ||| || | || | ||| ||||||||||||||||| |||||||| || || ||| Sbjct 21562 GATTCGATCGACAACGTCAAGCAGAAAATTCAGGACAAGGAAGGAATTCCCCCTGATCAG 21503 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAA 27584 |||||||| || || ||||| ||||| |||||||||| ||||| || ||| || || || Sbjct 21502 CAGCGTCTTATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGTACGCTGAGC-GATTACAA 21444 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| || || || || || || | ||||| || ||||| Sbjct 21443 CATCCAGAAGGAGTCGACCCTGCACCTGGTGCTTCGTCTGCGTGGTGG 21396 Score = 131 bits (144), Expect = 2e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| ||||||||| | ||||||||||| || || | || || ||| | Sbjct 21394 ATGCAGATCTTCGTCAAGACGTTGACCGGCAAGACGATCACATTGGATGTAGAGCCTTCA 21335 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 ||| || | || | ||| || ||||||||||| || || || || || |||||| Sbjct 21334 GATTCGATCGACAACGTCAAGCAGAAGATTCAGGACAAAGAAGGCATCCCCCCTGACCAG 21275 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || || || ||||| ||||| |||||||| | ||| ||||| ||||| || Sbjct 21274 CAGCGACTCATCTTCGCTGGCAAGCAGCTCGAGGACGGTCGCACCCTGAGTGACTACAAC 21215 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||||||||| | || || || | ||||| || ||||| Sbjct 21214 ATCCAGAAGGAATCCACGTTGCACCTCGTGCTTCGTCTCCGTGGTGG 21168 Score = 113 bits (124), Expect = 5e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || |||||||| ||||| || || |||||||| || || || || | Sbjct 21166 ATGCAGATTTTCGTCAAGACTCTTACGGGTAAAACTATTACCCTCGACGTGGAACCGTCG 21107 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || || | || | ||| || ||||| |||||||| || || || || |||||| Sbjct 21106 GACTCGATCGACAACGTCAAGCAAAAGATTCAAGACAAGGAAGGCATCCCCCCTGACCAG 21047 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || || || ||||| |||||||| ||||| | ||| || || ||||| || Sbjct 21046 CAGCGACTCATCTTCGCTGGCAAGCAACTTGAGGACGGTCGCACTCTGAGTGACTACAAC 20987 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || ||||| || || || || || || ||||||| || ||||| Sbjct 20986 ATTCAGAAGGAGTCGACCCTGCACCTGGTTCTGCGTCTGCGTGGTGG 20940 >seq43 Length=56266 Score = 140 bits (154), Expect = 4e-28 Identities = 184/253 (73%), Gaps = 4/253 (2%) Strand=Plus/Minus Query 31999 TCACAGCGCAAGGTGATATACGCCTGCCTCAAGAAGAACCTGTCGAGTGACATGAAGGTG 32058 |||||||| || || | | ||| || | ||| || || |||| || |||||||| Sbjct 25463 TCACAGCGTAAAGTACTGTTCGCGTGTTTGAAGCGCAAACTTACGAGCGAGGTGAAGGTG 25404 Query 32059 GCGCAGCTGTCGGGCTACGTGGCAG--AGCAAACGGCCTATCACCACGGCGAGGCGTCGC 32116 ||||||||| | ||||| | |||| |||| ||||| || |||||||| || || ||| Sbjct 25403 GCGCAGCTGGCAGGCTA--TTGCAGTGAGCACACGGCTTACCACCACGGTGAAGCTTCGT 25346 Query 32117 TCCAGGGCACCATTGTCAACCTTGCTCAGAACTTTGTCGGTGCAAATAACCTGAACTTAC 32176 | || ||||||||||| | || ||| ||||||| ||| | |||||||| ||| Sbjct 25345 TACACTCGACCATTGTCAATATGGCACAGGACTTTGTTGGTTCCAATAACCTCCCGCTAC 25286 Query 32177 TCGAGCCATCTGGACAGTTTGGGACCCGGCTCGCCGGTGGCAAGGATGCTGCGAGCTCCC 32236 | | ||||| || |||||||| || ||| | || || ||||||||||| ||| | | Sbjct 25285 TGTACCCATCAGGTCAGTTTGGAACACGGTTGCAAGGCGGAAAGGATGCTGCTAGCCCGC 25226 Query 32237 GTTACATCTTCAC 32249 |||| |||||||| Sbjct 25225 GTTATATCTTCAC 25213 >SEQ15627 Length=1670 Score = 138 bits (152), Expect = 1e-27 Identities = 169/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| ||||| ||||| || ||||||||||| || || || || || ||| | Sbjct 1599 ATGCAAATTTTTGTGAAGACCCTCACCGGCAAGACAATCACGCTCGACGTGGAGCCGTCG 1540 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || || | || | ||| ||||||||||||||||| ||||||| || ||||| Sbjct 1539 GACTCGATCGACAACGTCAAGCAGAAAATTCAGGACAAGGAAGGAATTCAACCTGACCAA 1480 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAA 27584 | |||||| || |||||||| ||||| ||||| || | ||| ||||| ||| ||||| || Sbjct 1479 CGGCGTCTCATCTTTGCTGGCAAGCAGCTCGAAGACGGTCGCACCCTGAGC-GACTACAA 1421 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || ||||| || || ||||| || || | ||||| || ||||| Sbjct 1420 CATTCAGAAGGAGTCGACGCTTCACCTGGTGCTTCGTCTACGTGGTGG 1373 >seq321 Length=26016 Score = 138 bits (152), Expect = 1e-27 Identities = 169/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || ||||| | ||||||||||| || || || || || ||| | Sbjct 9200 ATGCAGATCTTCGTGAAGACTTTGACCGGCAAGACCATCACACTCGACGTGGAGCCGTCG 9259 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || ||| | || ||||| ||||||||||||||||| |||||||| || |||||| Sbjct 9260 GACTCCATCGACAACGTGAAGCAAAAAATTCAGGACAAGGAAGGAATTCCCCCTGACCAG 9319 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAA 27584 ||||| || || || ||||| ||||| || ||||||| ||||| || ||| ||||| || Sbjct 9320 CAGCGCCTCATCTTCGCTGGCAAGCAGCTAGAGGATGGACGTACTCTGAGC-GACTACAA 9378 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| || || | || || || | ||||| || ||||| Sbjct 9379 CATCCAGAAGGAGTCGACGTTGCACCTTGTGCTTCGTCTGCGTGGTGG 9426 Score = 134 bits (148), Expect = 2e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||| |||||| | ||||||||||| || || | || || ||| | Sbjct 9656 ATGCAGATCTTTGTGAAGACGTTGACCGGCAAGACCATCACGTTGGATGTGGAGCCGTCG 9715 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || |||| || ||||| || |||||||||||||| || || ||||| ||||| Sbjct 9716 GACTCAATTGACAACGTGAAGCAGAAGATTCAGGACAAGGAAGGCATCCCTCCTGACCAA 9775 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || || || || |||||||| ||||| || ||||||| ||||| || ||||| || Sbjct 9776 CAACGACTCATCTTTGCTGGCAAGCAGCTAGAGGATGGACGTACTCTGAGTGACTACAAC 9835 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || ||||| || |||||||| | || ||||||| || ||||| Sbjct 9836 ATTCAGAAGGAGTCAACTCTTCACTTGGTGCTGCGTCTCCGTGGTGG 9882 Score = 125 bits (138), Expect = 8e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||| |||||| | ||||||||||| || || | || || ||| | Sbjct 9428 ATGCAGATCTTTGTGAAGACGTTGACCGGCAAGACCATCACGTTGGATGTGGAGCCGTCG 9487 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || |||| || ||||| || |||||||||||||| || || ||||| ||||| Sbjct 9488 GACTCAATTGACAACGTGAAGCAGAAGATTCAGGACAAGGAAGGCATCCCTCCTGACCAA 9547 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || || || || |||||||| ||||| || ||||||| ||||| || ||||| || Sbjct 9548 CAACGACTCATCTTTGCTGGCAAGCAGCTAGAGGATGGACGTACTCTGAGTGACTACAAC 9607 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || ||||| || || || || || || | || ||||| ||||| Sbjct 9608 ATTCAGAAGGAGTCGACCCTCCACCTGGTGCTTCGCCTTCGTGGTGG 9654 Score = 125 bits (138), Expect = 8e-24 Identities = 176/242 (73%), Gaps = 5/242 (2%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || || ||||| ||||| || || |||||||| || || || ||| | Sbjct 9884 ATGCAGATTTTCGTGAAGACTCTTACGGGTAAAACTATTACCCTGGACGTCGAGCCGTCC 9943 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || |||| ||| ||||| || |||||||||||||| || |||||||| |||||| Sbjct 9944 GACTCGATTGACAATGTGAAGCAGAAGATTCAGGACAAGGAAGGCATTCCTCCTGACCAG 10003 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAA 27584 |||||||| || || || || ||||| || || |||| ||| || | ||| || || || Sbjct 10004 CAGCGTCTGATCTTCGCCGGCAAGCAGCTAGAAGATGGTCGCACATTGAGC-GATTACAA 10062 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACAAGTTTAAAG 27644 |||| ||||| || ||||| || || || | || || || || || ||| |||| | Sbjct 10063 CATCCAGAAGGAGTCGACTCTCCACCTTGTGCTTCGCCTGCGTGGAGG-CAA--TTAAGG 10119 Query 27645 TT 27646 || Sbjct 10120 TT 10121 >seq1 Length=128069 Score = 134 bits (148), Expect = 2e-26 Identities = 361/550 (66%), Gaps = 3/550 (1%) Strand=Plus/Plus Query 64319 TGTGGGAGCTTTACAAGAAAGCCATCGCAAGTTTCTGGACGGTCGAGGAGGTTGATCTCG 64378 ||||| | | |||||||| ||| ||| |||||||||| ||| ||| | ||||| | Sbjct 110944 TGTGGCAAATGTACAAGAAGGCCGAGGCATCCTTCTGGACGGCCGAAGAGCTCGATCTAG 111003 Query 64379 CCAAGGATCTCAGCGACTGGGAAAACCTAAACTCACAGGAACAGCACTTCATCAAGTTGG 64438 | || |||| ||||||| ||||| | | || | |||||||||||| | Sbjct 111004 TGCACGACCTCAAGGACTGGGGCAACCTCACGGATAACGAGCGCCACTTCATCAAGCACG 111063 Query 64439 TCCTAGCATTCTTCGCATCAAGTGACGGAATTGTGTTTGAGAATTTGGACCTAAATTTTA 64498 | || || ||||| || | || ||||| || || ||||| |||| | || || | Sbjct 111064 TGCTCGCCTTCTTTGCGGCCAGCGACGGCATCGTCAACGAGAACTTGGCAATGAACTTCA 111123 Query 64499 CAAAGGATGTTCAGATCCCAGAGGCGCGGTCATTCTATGCGTATCAGGGATTTAACGAAA 64558 || || || ||| | ||||||||||||| ||||||| | ||| | || | Sbjct 111124 GCAACGAAGTGCAGGTACCAGAGGCGCGGTGCTTCTATGGCTTCCAGATCGCCATTGAGA 111183 Query 64559 GTATTCATGGCGAGACGTATTCGCTCATGATTGACAAGTTTGTTCGGGATCCTGTCGAGA 64618 || || |||| || ||||| | ||||||| || | ||| | || |||| Sbjct 111184 ACATCCACTCCGAGGTCTACTCGCTGCTTATTGACACGTACATCAAGGACGCGGTGGAGA 111243 Query 64619 AGGATGGACTGTTCAGGGCTATAGAGACTGTACCCGCTGTTACTAAAAAGGCTGAATGGG 64678 |||| ||| | | ||||| || || | || ||| | || || || | |||| Sbjct 111244 AGGACCACCTGCTGCGTGCTATTGACACCATCCCATGTGTCAAGAAGAAAGCACACTGGG 111303 Query 64679 CCATCCGGTGG-ATGA--ATCGTGGGTCGTCGTTTGGTCAGCGTCTCGCAGCTTTTGCCT 64735 | |||| ||| || ||||| ||| |||| | ||||||| || || || Sbjct 111304 CTCTCCGATGGTGCGACCCTCGTGTGTCCTCGTATCCGGAGCGTCTGCTCGCCTTCGCGG 111363 Query 64736 GTGTGGAAGGAATTTTCTTTTCTGGGTCATTCTGTTCTATTTTCTGGCTAAAAAAGCGGG 64795 |||||||| || ||||| || || || ||||| || || |||||||| || ||||| | Sbjct 111364 CGGTGGAAGGCATCTTCTTCTCGGGCTCCTTCTGCTCCATCTTCTGGCTCAAGAAGCGCG 111423 Query 64796 GCCTGATGCCAGGTCTGTCGTTTTCGAACGAGCTGATCTCTCGGGACGAGGGGCTCCACC 64855 | || ||||| ||||| || ||||||||||| || || |||||||| | ||| Sbjct 111424 GTCTCATGCCGGGTCTCAGTTTCTCGAACGAGCTCATTAGCCGTGACGAGGGCATGCACA 111483 Query 64856 AAGAATTTGC 64865 || ||||| Sbjct 111484 CGGACTTTGC 111493 >seq1885 Length=10629 Score = 118 bits (130), Expect = 1e-21 Identities = 142/193 (74%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 27403 ATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCA 27462 || ||||| |||||||| ||||| || || |||||||| || || || || || ||| | Sbjct 6053 ATCATGCAGATCTTTGTGAAGACCCTGACGGGCAAGACCATCACGCTGGACGTGGAGCCG 6112 Query 27463 GGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522 || ||||||| || | ||| ||||| ||||||||||| || || || || ||| Sbjct 6113 TCCGACAGCATTGACAACGTCAAGCAGAAAATCCAGGACAAGGAAGGCATCCCGCCTGAC 6172 Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTAT 27582 |||||||| || || || || || ||||| |||||||| | || || || | ||||| Sbjct 6173 CAGCAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACGCTCTCGGACTAC 6232 Query 27583 AATGTCCAAAAGG 27595 || |||| |||| Sbjct 6233 AACATCCAGAAGG 6245 >seq7045 Length=3816 Score = 96.9 bits (106), Expect = 4e-15 Identities = 354/554 (64%), Gaps = 3/554 (1%) Strand=Plus/Minus Query 64315 GATTTGTGGGAGCTTTACAAGAAAGCCATCGCAAGTTTCTGGACGGTCGAGGAGGTTGAT 64374 ||| ||||| || | ||||||||||| || |||||||| | |||||| | ||| Sbjct 3310 GATGTGTGGCAGATGTACAAGAAAGCGGAAGCTTCGTTCTGGACAGCCGAGGAACTCGAT 3251 Query 64375 CTCGCCAAGGATCTCAGCGACTGGGAAAACCTAAACTCACAGGAACAGCACTTCATCAAG 64434 |||| | || |||| || ||||| || || | | || | ||||||||||| Sbjct 3250 CTCGTGCACGACCTCAAAGATTGGGAGAAACTCACGGATAATGAGCGCCACTTCATCAAA 3191 Query 64435 TTGGTCCTAGCATTCTTCGCATCAAGTGACGGAATTGTGTTTGAGAATTTGGACCTAAAT 64494 || || ||||| ||||| | ||||| || || || ||| ||| ||| | | || Sbjct 3190 CACGTGCTCGCATTTTTCGCTGCCAGTGATGGGATCGTCAATGAAAATCTGGCCATGAAC 3131 Query 64495 TTTACAAAGGATGTTCAGATCCCAGAGGCGCGGTCATTCTATGCGTATCAGGGATTTAAC 64554 || | || || || ||| | || || || || | ||||| | | ||| | Sbjct 3130 TTCAGCAACGAAGTGCAGGTGCCTGAAGCTCGATGCTTCTACGGTTTCCAGATCGCCATT 3071 Query 64555 GAAAGTATTCATGGCGAGACGTATTCGCTCATGATTGACAAGTTTGTTCGGGATCCTGTC 64614 || | || || ||| || || || | ||||||| || | | |||| |||| Sbjct 3070 GAGAACATCCACTCCGAAGTCTACTCACTGCTCATTGACACGTATATCAAGGATACTGTG 3011 Query 64615 GAGAAGGATGGACTGTTCAGGGCTATAGAGACTGTACCCGCTGTTACTAAAAAGGCTGAA 64674 ||||| | ||| | | || || ||||| | ||| ||| || || || | Sbjct 3010 GAGAAAAACTATCTGCTGCGTGCCATCGAGACAATTCCCTGCGTTCAAAAGAAAGCGAAC 2951 Query 64675 TGGGCCATCCGGTGGATGAATC---GTGGGTCGTCGTTTGGTCAGCGTCTCGCAGCTTTT 64731 ||||| | ||| | | ||| |||||| | |||| | || ||| Sbjct 2950 TGGGCATTGAAATGGTGCGACCCGCGTGTGTCGTCCTACCCGGAGCGATTGCTGGCGTTT 2891 Query 64732 GCCTGTGTGGAAGGAATTTTCTTTTCTGGGTCATTCTGTTCTATTTTCTGGCTAAAAAAG 64791 || | |||||||| || |||||||| ||||| ||||| ||||||||||| || ||| Sbjct 2890 GCTTCAGTGGAAGGTATCTTCTTTTCGGGGTCGTTCTGCAGCATTTTCTGGCTCAAGAAG 2831 Query 64792 CGGGGCCTGATGCCAGGTCTGTCGTTTTCGAACGAGCTGATCTCTCGGGACGAGGGGCTC 64851 || ||||| ||||| ||||| || ||||| ||| ||||| ||| ||||| || | Sbjct 2830 CGAGGCCTCATGCCTGGTCTCAGCTTCTCGAATGAGATGATCAGTCGTGACGAAGGTATG 2771 Query 64852 CACCAAGAATTTGC 64865 ||| ||| || || Sbjct 2770 CACACAGACTTCGC 2757 >seq8293 Length=3242 Score = 95.1 bits (104), Expect = 1e-14 Identities = 96/125 (77%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 27508 GGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGT 27567 |||||||| || |||||||||||||| || || ||||| ||||| |||||||| | || Sbjct 2445 GGAATTCCCCCTGACCAGCAGCGTCTGATCTTCGCTGGCAAGCAGCTCGAGGACGGCCGC 2504 Query 27568 ACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGC 27627 || || | ||||| || |||| ||||| || || || || ||||| | ||||| || Sbjct 2505 ACGCTGTCGGACTACAACATCCAGAAGGAGTCGACCCTGCACCTAGTGCTCCGTCTGCGT 2564 Query 27628 GGTGG 27632 ||||| Sbjct 2565 GGTGG 2569 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570139028853680