Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20megakarya_20[genbank_20GCA_5F002215365.1_202017-07- 06] 24,039 sequences; 101,504,516 total letters Query= NC_031224.1 Length=59443 Score E Sequences producing significant alignments: (Bits) Value seq465 89.7 2e-13 >seq465 Length=22214 Score = 89.7 bits (98), Expect = 2e-13 Identities = 114/157 (73%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 52107 GATATGGCGTTGGCTCCCTGCCATACACTATTCCAATTCTATGTAGCTGAAGGTAAGCTT 52166 || |||||| || |||| || || | | | || ||||| || ||||| || || | Sbjct 6714 GAGATGGCGCTGCCTCCGTGTCACATGTTCTGTCAGTTCTACGTGGCTGATGGGGAGTTG 6655 Query 52167 TCGTGCCATTTGTATCAGCGGTCTGCCGACATGTTCTTGGGCGTTCCGTTTAACATTGCC 52226 || ||||| |||| ||||| || ||||| ||| | | || |||||||| ||||||||| Sbjct 6654 TCCTGCCAGATGTACCAGCGCTCGGCCGATATGGGCCTCGGTGTTCCGTTCAACATTGCC 6595 Query 52227 AGCTATTCCTTGCTGACGCATCTGATTGCTCGAGCAG 52263 ||||| | |||||||| | ||| |||| | || || Sbjct 6594 AGCTACGCTTTGCTGACACGACTGGTTGCCCAAGTAG 6558 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 190041734601790