Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20multivora_20[genbank_20GCA_5F001314345.1_202015-10- 14] 2,762 sequences; 40,062,232 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq12 95.1 1e-14 >seq12 Length=196586 Score = 95.1 bits (104), Expect = 1e-14 Identities = 112/150 (75%), Gaps = 4/150 (3%) Strand=Plus/Plus Query 16502 TCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTCCGCTATT 16561 || ||||| |||||||| ||||| ||||| || || |||||||| ||||| || | | Sbjct 58605 TCCGAGTGAATGTTCTCAATGGCAATCTGGAAGCCGTAGAAGCAGCGAGCTTCAGGCACC 58664 Query 16562 TGTACTTCCACGTAAAATCGTTCC--GCCAGGTTCTCATTCACGATACCGTCACTTGCAG 16619 || || || | || |||| ||||||||||| |||||||||||||| || |||| Sbjct 58665 TGCACCTCATTGCTGAA--GTTCATGGCCAGGTTCTCGTTCACGATACCGTCGCTGGCAG 58722 Query 16620 CAAAAAACGCCAATATGTGCTTAATGAAAT 16649 | || || || | | |||||| ||||||| Sbjct 58723 CGAAGAAAGCGAGCACGTGCTTGATGAAAT 58752 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511396743417840