Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20multivora_20[genbank_20GCA_5F001314345.1_202015-10- 14] 2,762 sequences; 40,062,232 total letters Query= NC_005336.1 Length=139962 Score E Sequences producing significant alignments: (Bits) Value seq246 91.5 1e-13 >seq246 Length=44286 Score = 91.5 bits (100), Expect = 1e-13 Identities = 91/118 (77%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 5380 GTTAAACAGCACCACCCCGACATTGCCTCGGTAGTCTTCGTCGATAACGCCAGCGCCCAC 5439 ||| ||||| | ||| || |||||||| ||||| || |||| || ||||||||||| Sbjct 16514 GTTGAACAGGATCACACCCACATTGCCGCGGTAATCAGCGTCAATGACGCCAGCGCCTGT 16455 Query 5440 GTCGATAAAGTGTTTGACCGCAAGGCCGGAACGTGGTGCTATGCGTCCGTAGCAACCA 5497 ||||||||| | || ||||||||| ||||| || || | ||| ||||||||||| Sbjct 16454 GTCGATAAATTTCTTCCACGCAAGGCCCGAACGAGGCGCCACGCGCGCGTAGCAACCA 16397 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447734941417440