Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20multivora_20[genbank_20GCA_5F001314345.1_202015-10- 14] 2,762 sequences; 40,062,232 total letters Query= NC_005337.1 Length=134431 Score E Sequences producing significant alignments: (Bits) Value seq246 104 2e-17 >seq246 Length=44286 Score = 104 bits (114), Expect = 2e-17 Identities = 129/177 (73%), Gaps = 0/177 (0%) Strand=Plus/Minus Query 5590 GATCAGCTGCGCTATTCGGTCGCCCGTCTTTACCTCGAAATCGTTGTGGCCGAAGTTGAA 5649 ||||||||| || | || || || ||| || |||||| | | | | |||||| Sbjct 16568 GATCAGCTGTGCCACACGATCTCCACGCTTGACAGGGAAATCCTCGCTGGAGTGGTTGAA 16509 Query 5650 CAGCACCACGCCCACGTTGCCGCGGTAGTCGGCGTCTATCACGCCCGCGCCCACGTCGAT 5709 ||| | ||| ||||| ||||||||||| || ||||| || ||||| ||||| |||||| Sbjct 16508 CAGGATCACACCCACATTGCCGCGGTAATCAGCGTCAATGACGCCAGCGCCTGTGTCGAT 16449 Query 5710 GAAGTGCTTGACCGCCAGGCCGGAGCGGGGAGCCACGCGGCCGTAGCACCCATCGGG 5766 || | ||| ||| ||||| || || || |||||||| ||||||| ||||| || Sbjct 16448 AAATTTCTTCCACGCAAGGCCCGAACGAGGCGCCACGCGCGCGTAGCAACCATCCGG 16392 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430039923562544