Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20multivora_20[genbank_20GCA_5F001314345.1_202015-10- 14] 2,762 sequences; 40,062,232 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq1294 120 3e-22 >seq1294 Length=4314 Score = 120 bits (132), Expect = 3e-22 Identities = 156/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 24995 AACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTC 25054 ||||||||| || || || ||||||||||| || || | ||||| | || |||||| | Sbjct 3833 AACAATGCAGATCTTCGTGAAGACTTTGACGGGGAAGACGATCACGCTGGACGTGGAGCC 3892 Query 25055 GTCTGACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114 ||| ||| ||||||| ||||||| || || ||||| || || ||||| ||||| Sbjct 3893 GTCGGACTCTATCGACAACGTGAAGCAGAAGATTCAGGACAAGGAGGGCATTCCTCCTGA 3952 Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174 ||| ||||| | || || |||||||| || | || || | ||| || || |||| || Sbjct 3953 CCAGCAGCGATTGATCTTCGCCGGCAAGCAGCTGGAGGACGGTCGTACGCTGAGCGACTA 4012 Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 ||| || || || || || || || || | ||||| Sbjct 4013 CAACATCCAGAAGGAGTCTACTCTTCACCTGGTGCT 4048 Score = 116 bits (128), Expect = 3e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||||||||| || || | ||||| | || |||||| |||| Sbjct 4065 ATGCAGATCTTTGTGAAGACTTTGACGGGGAAGACGATCACGCTGGACGTGGAGCCGTCG 4124 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||| ||||||| ||||||| || || ||||| || || ||||| |||||||| Sbjct 4125 GACTCTATCGACAACGTGAAGCAGAAGATTCAGGACAAGGAGGGCATTCCTCCTGACCAG 4184 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| | || || |||||||| || | || || | ||| || || |||| ||||| Sbjct 4185 CAGCGATTGATCTTCGCCGGCAAGCAGCTGGAGGACGGTCGTACGCTGAGCGACTACAAC 4244 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || || || || || || || || | ||||| Sbjct 4245 ATCCAGAAGGAGTCTACTCTTCACCTGGTGCT 4276 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433313413367030