Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20multivora_20[genbank_20GCA_5F001314345.1_202015-10- 14] 2,762 sequences; 40,062,232 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq75 91.5 1e-12 >seq75 Length=108044 Score = 91.5 bits (100), Expect = 1e-12 Identities = 207/311 (67%), Gaps = 3/311 (1%) Strand=Plus/Plus Query 518015 ACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACT 518074 ||||| || || ||||| || ||||| |||| | || | |||| ||| || | ||| Sbjct 5142 ACAAGGCGGTTGTCAAAGTCCTCACCGCCCAGATGCGTGTCGCCTGCCGTCGCCTTCACT 5201 Query 518075 TGGAAAAGTCCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCA 518134 | ||| | || ||||||| | | || | || ||| || ||||| || | |||| Sbjct 5202 TCGAAGATCCCTTCTTCAATGGTGAGCAGCGAGACGTCAAACGTCCCACCGCCAAGATCA 5261 Query 518135 AAAATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCA 518194 || || || || || || ||| | |||||||||||||| || | ||||||| Sbjct 5262 AAGATCAGCACGTTGTGCTCGCCCCCTT---TCTTATCAAGACCATAGGCGATAGCAGCA 5318 Query 518195 GCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTA 518254 ||||| || || || || || | | || || | ||| ||||| ||| ||||| || Sbjct 5319 GCAGTCGGCTCGTTGATGATACGGAGTACGTTCAAACCGGCAATAACTCCGGCATCCTTG 5378 Query 518255 GTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACT 518314 || || || | || || ||||| || || || || || || | || || | | || Sbjct 5379 GTCGCCTGGCGCTGCGAGTCGTTGAAGTAGGCTGGGACCGTCACCACCGCGTTCTTCACC 5438 Query 518315 TCTTTACCAAT 518325 | ||||||||| Sbjct 5439 TGTTTACCAAT 5449 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780685340461972