Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20multivora_20[genbank_20GCA_5F001314345.1_202015-10- 14] 2,762 sequences; 40,062,232 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq75 89.7 4e-12 >seq75 Length=108044 Score = 89.7 bits (98), Expect = 4e-12 Identities = 114/157 (73%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 550380 TTGGTCAAGAAGTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAAC 550439 ||||| || | || | | | || || | || || ||||| || || || ||||| || | Sbjct 5448 TTGGTAAACAGGTGAAGAACGCGGTGGTGACGGTCCCAGCCTACTTCAACGACTCGCAGC 5389 Query 550440 GTCAAGCTACTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATG 550499 | || || || || ||||| ||| |||||| || | || || || ||||| ||||| | Sbjct 5388 GCCAGGCGACCAAGGATGCCGGAGTTATTGCCGGTTTGAACGTACTCCGTATCATCAACG 5329 Query 550500 AACCTACTGCTGCTGCACTTGCATATGGACTTGATAA 550536 | || ||||||||||| | || ||||| |||||||| Sbjct 5328 AGCCGACTGCTGCTGCTATCGCCTATGGTCTTGATAA 5292 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029149932983380