Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20multivora_20[genbank_20GCA_5F001314345.1_202015-10- 14] 2,762 sequences; 40,062,232 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq1848 84.2 2e-11 >seq1848 Length=2031 Score = 84.2 bits (92), Expect = 2e-11 Identities = 205/311 (66%), Gaps = 0/311 (0%) Strand=Plus/Minus Query 41016 TTGTGCGCGTGGAACCCAACGGACGTACATTTGATGGCATTGCCACCTTGTCATTTGTTA 41075 |||| ||||||||||| | || | | |||||| ||||| || || || |||| Sbjct 599 TTGTCGGCGTGGAACCCTGCTGATCTTAACGAGATGGCGTTGCCTCCCTGCCACATGTTC 540 Query 41076 TGTCAGTTTTACGTTTGCAATGGTGAACTGTCATGTCAATTGTATCAAAGATCAGGTGAC 41135 || ||||| ||||| |||| || |||| || || |||| ||| | || | ||| Sbjct 539 TGCCAGTTCTACGTGGCTGATGGGGAGTTGTCCTGCCAGATGTACCAACGTTCGGCCGAC 480 Query 41136 ATGGGACTAGGGGTCCCGTTTAACATAGCGAGTTATGCTCTGCTCACGTATATGATTGCA 41195 |||||||| || || || || ||||| || ||||| || ||||| || || | ||| Sbjct 479 ATGGGACTTGGAGTGCCATTCAACATCGCCAGTTACGCACTGCTTACACGACTGGTGGCA 420 Query 41196 CACGTTACCAATTTAAAACCTGGTGAATTTGTTCACACGTTAGGAGATGGACATATTTAC 41255 || || | | || ||||| || ||||| || | || |||| ||| | || Sbjct 419 CAAGTGGCTGGGCTGAAGCCTGGCGAGTTTGTCCATGTCATTGGCGATGCGCATGTGTAT 360 Query 41256 ATTAATCACATAGAGCCGTTAACAGAACAACTGACACGAAAACCTAGACCATTTCCAACG 41315 | || ||| | |||||| | | | || | ||||| | ||| | | || |||||| Sbjct 359 CTGAACCACGTTGAGCCGCTTCAAAAGCAGTTAACACGTACTCCTCGCGCGTTCCCAACG 300 Query 41316 CTACTTATTAA 41326 || | ||||| Sbjct 299 CTTCACATTAA 289 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397442620885810