Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20multivora_20[genbank_20GCA_5F001314345.1_202015-10- 14] 2,762 sequences; 40,062,232 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq439 253 2e-62 seq168 140 4e-28 seq12 140 4e-28 seq1294 138 1e-27 seq122 132 5e-26 seq55 125 8e-24 seq192 118 1e-21 seq228 87.8 2e-12 >seq439 Length=25118 Score = 253 bits (280), Expect = 2e-62 Identities = 1107/1728 (64%), Gaps = 44/1728 (3%) Strand=Plus/Plus Query 80041 CGCAGATAGTACATGCCCGTCTTGAGGCCCTTCTTCCAGCCGTACAGGTGCATAGAACTG 80100 |||| |||||||||||||||||||| |||||||||||| |||| | |||||| || || Sbjct 17474 CGCATGTAGTACATGCCCGTCTTGAGCCCCTTCTTCCAGGCGTAGAAGTGCATGGACGTG 17533 Query 80101 AGCTTCGCAAGTGTGGGGTTCTCCATGAAGATGTTCAGAGACTGAGACTGACAGATGAAA 80160 ||||| || || |||| | ||| |||||| || |||||| ||| || ||| | Sbjct 17534 AGCTTGCTAATCGTCGGGTCGGCGATGTGGATGTTGAGCGACTGACTCTGGCAAATGTAG 17593 Query 80161 GCCCCACGATCTGCCGCCATTTCAATAATTGACTTTTGTGGAATTTCCCATAC-----TG 80215 || ||||| || || | || || | | | ||| || || ||||| || || Sbjct 17594 GCGCCACGGTCGGCAGACAGGTCCAGCACAGCCTTCTGCTTGATCTCCCACACCGTCTTG 17653 Query 80216 TACGATACACCTTACGAAGCTCCTCTGGAATGTCC---AGATTTTGCACACTGCCACCGT 80272 ||| | | |||| || | | || || || || | || ||||| ||| |||| Sbjct 17654 TAC--TTCTCCTT--GACG-TGGTCCGGGATTACCTTCACGTTCTGCACGGAGCCGCCGT 17708 Query 80273 CCTTTACAATTTGATTTTTCAATTCAGACGTCCAGACACCAAGCTTGTGCAGATCTTTCA 80332 | || | || || || || || | |||||||| ||| || | | ||| || |||| Sbjct 17709 CGTTCAGGATCTGGTTGCGCACCTCCGGCGTCCAGATACCCAGATCGATCAGCTCGTTCA 17768 Query 80333 CAAGGTGCTTGTTAATCATGACAAACTCTCCCGCGAGGGTGCGACGCAGATACAGGTTTG 80392 |||| |||||| | || ||||| || || || ||||| |||| ||| | Sbjct 17769 TCAGGTACTTGTTCACGATCGTGAACTCGCCTGCAAGCACACGACGGTTGTACATGTTGG 17828 Query 80393 TAGTGTAAGGCTCAAATGCCTCGTTGTTTCCGAGGATCTGAGCCGTGCTCGCCGTCGGCA 80452 ||||| ||||| | | ||||||||| || ||||||||||| || |||||||||| Sbjct 17829 ACGTGTACGGCTCGATAGACTCGTTGTTGCCCAGGATCTGAGCAGTAGAAGCCGTCGGCA 17888 Query 80453 TCGGGCCGACCAACAGTGAATTCCGCAGGCCGTGCTTCTTGATATCCTC-----GCGCAA 80507 | || | |||| ||| || || || || |||||||| | | | ||| | | | Sbjct 17889 TGGGAGCCACCAGCAGCGAGTTGCGAAGACCGTGCTTGATCACGTTCTCCTTGAGGGTAG 17948 Query 80508 ATCTGACCAAAAATCAACCCCAACGCTGTGAC--CCCACATGTCGTGCTGCAAGATGCCC 80565 | | || | | | | || || || || ||||||||||| ||| |||| ||| Sbjct 17949 CCCAGTCCCACAGGCCAGAAGAAGGC-GTCACGCCCCACATGTCGAACTGGAAGACACCC 18007 Query 80566 TCCGACGCCGGAGACCCCGCGAACGTCTCGTACGGGCCCTCCGTCTTGGCCAGCTC---A 80622 | || || || ||| ||||||||| || || ||| | ||| || | ||| Sbjct 18008 TTGCTAGCTGGCGAGCCCTGGAACGTCTCATAGGGCCCCAACTCCTTCGCAATCTCCATC 18067 Query 80623 CACGACTCCATAAGGGCCGCGTGATAAATGCACTCAAAGACGCCCTTGTTCACACCGCGC 80682 ||| |||||| || ||| || ||| ||| |||| | |||||| | ||| Sbjct 18068 GACGTCTCCAT---GGAACCGTAGTAGATGGTCTCGAAGATGTTCTTGTTGAGTTCGCTG 18124 Query 80683 GCCTG-TGGGTCGTCGAACGACAAGCCCATCATCATGAACACGTCAGCCAGGCCCTGAAC 80741 ||||| ||| || ||||||| || ||||| |||||| |||||||||| |||||||| Sbjct 18125 GCCTGCTGGCTC-TCGAACGGATAGTTCATCAGAATGAACGCGTCAGCCAGACCCTGAAC 18183 Query 80742 GCCGATGGCGATCGGGCGGTGGCGCTTGTTCGA-TCGCTCGGCCTCCGGAATTGGGTAAA 80800 ||||| ||| |||||||||||| |||| || | || |||||| | ||||| Sbjct 18184 ACCGATACCGACGGGGCGGTGGCGCATGTTGGACTTGC-GAGCCTCCACCACGGGGTAGT 18242 Query 80801 AGTTATTATCGATGACGCGGTTCAGGTTGCGTGTAACAACCCGTGTAACATCATGAAGTT 80860 |||| |||||||| |||||| || || || || ||| || || | || | Sbjct 18243 AGTTGACGTCGATGACCTTGTTCAGATTACGCGTCACCACCTTGACCACCTCGTACAGCT 18302 Query 80861 TCTGAAAGTCGAATTGGTTCCCCTTCACAAATGCCGGAAGGCTCAGGGACGCCAGATTGC 80920 |||| || ||| | ||| ||| || || || | || |||| ||||| Sbjct 18303 TCTGGTAGCTGAAAACTCCCTCCTCCACGAACTTGGGGAGCGCGACAGAGGCCAAATTGC 18362 Query 80921 ACACGGCCACCTCTTCAGCATCTGTAAACTCGACGATTTCCGTGCACAAATTAGAAGACT 80980 |||| ||||| || || | | || |||| | | || |||||| ||| || Sbjct 18363 ACACAGCCACTTCATCGGGAGACGTGTACTCCATCACCTCACAGCACAAGTTACTGGAAC 18422 Query 80981 TAATTGTACCCAGGTTTTTCTGGTTTGACTTGGCGTTGCAAGCGTCCTTGTAGCACATGT 81040 || ||||||||||| | |||||| || ||| ||| |||||||||||| |||| Sbjct 18423 GGATCGTACCCAGGTTCTGCTGGTTGGATTTGCGGTTAGCTGCGTCCTTGTAGAGCATGA 18482 Query 81041 ACGGGGTACCGGTCTCGACCTGTGACTTGAGGATGGCGTCCCAAATCTCGCGCGCCTTGA 81100 | || ||| || || | ||| | | ||||| ||| ||| | || | || |||| Sbjct 18483 AAGGCACACCCGTTTCAATCTGGGCGTCAAGGATCGCGAACCACAGCTGCTGGGCGTTGA 18542 Query 81101 CCACCTTGCGGAATTTGCCTTCGGCCACATACTTGGCGTA-AGCTTCGTCGAACTTGGCA 81159 |||||| ||||| | | ||||| |||| || || || |||| || Sbjct 18543 TGGTCTTGCGAGCACGCCCTTCCTTCTCGTACTTCTCGTAGAGGGTC-TCAAACTCTTCA 18601 Query 81160 CCGTGAAGTTCAGTGAGGTCTGGGCACTCGTTAGGGCACATCAGGTGCCAGTCGGTGTCG 81219 || || ||| | || || ||||| || | || ||| | | | | Sbjct 18602 CCCCAGCACTCGTAGAGTCCAGGAGCTTCATTAGGACAGAACAAACTCCACTTGCCATTG 18661 Query 81220 TTCTCTACAGCCTTCATGAAAGCGTCAGGGATCCAGAGGGCGGTGAACAGGTCGCG-GCA 81278 ||| || |||||||| || || | ||| | ||| ||||| ||| || ||| Sbjct 18662 GCCTCCACCCTTTTCATGAAGAGATCGGGCACCCACAATGCGTAGAACAAGTCACGAGCA 18721 Query 81279 GCGCGCCTCCTCATCACCCTGGTTGAGGCGCAACTCGAGAAAGTCCATGATGTCCGCATG 81338 || ||| | ||| || || ||| | || || || || | | || || || Sbjct 18722 -CGGTGGAGCTCGTTACCGTGATTCTTGCGGAGATCCAGGAACTCGAACACATCGGCGTG 18780 Query 81339 CCATGGCTCCAGATACACGGCGATCGACCCCTTGCG---ACGGCCACCCTGGTTGACGTA 81395 ||| |||||||| || | ||||| || |||||||| | || ||||||| ||||| Sbjct 18781 CCACGGCTCCAGGTAGATGGCGAAGGAGCCCTTGCGCTTGCCTCCTCCCTGGTCCACGTA 18840 Query 81396 ACGGGCAGTCGCGTTAAATACACGCAACATAGGGATGATACCATCTGACTGACCGTTCGT 81455 || || || | || || || | |||||| ||||| || |||| || ||| ||||| Sbjct 18841 GCGAGCGGTATCATTGAAGACTCTCAACATGGGGATAATTCCATTGGAGGAACCATTCGT 18900 Query 81456 ACCCACGATACGCGACCCCTTGGCGCGCACCTTGCTGATTGAAAGACCGATGCCACCTGA 81515 || ||| | | || || | ||| || || || || || || | Sbjct 18901 GCCGCGGATGTAGCTGTTCGTCGCACGGATATTGTGCATACTAATGCCAATACCTCCAGC 18960 Query 81516 CCACTTTGAAATCTGAGCACACCGGTTCATGGTCTCATAAATTCCCTCGATGCTATCTTT 81575 |||||| || || |||||| | |||| ||| || || || |||||||| || | Sbjct 18961 CCACTTGGAGATGCAGGCACACTGCTTCAAGGTGTCGTAGATGCCCTCGATCGAGTCATC 19020 Query 81576 TTTCATGTCAAGCAAGAAACAGCTTGACATCTGAGGGCTTTTTGAGCCGGCATTGAACAG 81635 | ||| | | || ||| || |||| || || | | || || ||||||||||| Sbjct 19021 CTGCATCGCCAACAGGAAGCAAGAGGACAATTGCGGTCGTGGTGTACCAGCATTGAACAG 19080 Query 81636 TGTTGGGGTCGCGTGAATGAAATAACGGTTTGACATCAGGTCATAGGTTTCCTTGACGCG 81695 || ||||| |||||| ||||| | | |||||||| || || || ||| || || Sbjct 19081 CGTCGGGGTAGCGTGAGTGAAAAACTTCTGCGACATCAGCTCGTACGTCTCC-AGA-GC- 19137 Query 81696 TGGAATATCGTCAC---CGTGAATACCGATAGCTACACGCATAAACAT 81740 || | ||||| ||| ||||||| ||| || ||||||| ||| Sbjct 19138 TGCCTTGATGTCACTCTTGTGGATACCGAGAGCCACGCGCATAATCAT 19185 >seq168 Length=56023 Score = 140 bits (154), Expect = 4e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| ||||||||| | || || ||||| ||||| ||||| || ||| | Sbjct 52181 ATGCAGATCTTCGTCAAGACGTTGACGGGTAAGACGATTACCCTTGACGTGGAGCCGTCG 52240 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 ||| ||| | || | ||| || ||||||||||||||||| || ||||| |||||| Sbjct 52241 GATTCCATCGACAACGTCAAGCAAAAGATTCAGGACAAGGAGGGCATCCCTCCTGACCAG 52300 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| || || ||||| ||||| || ||||||| || || || ||||| || Sbjct 52301 CAGCGTCTGATCTTCGCTGGCAAGCAGCTGGAGGATGGCCGCACTCTGAGTGACTACAAC 52360 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| || || || || || || | || || ||||| || Sbjct 52361 ATCCAGAAGGAGTCGACGCTGCACCTGGTGCTTCGCCTGCGCGGCGG 52407 Score = 134 bits (148), Expect = 2e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| |||||||| || || |||||||| ||||| || || || ||| | Sbjct 51725 ATGCAGATCTTCGTCAAGACCCTCACTGGCAAGACGATTACCCTCGACGTGGAGCCGTCG 51784 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 ||| ||| | || | ||| || ||||||||||||||||| || ||||| |||||| Sbjct 51785 GATTCCATCGACAACGTCAAGCAAAAGATTCAGGACAAGGAGGGCATCCCTCCTGACCAG 51844 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| || || ||||| ||||| || ||||||| || || || ||||| || Sbjct 51845 CAGCGTCTGATCTTCGCTGGCAAGCAGCTGGAGGATGGCCGCACTCTGAGTGACTACAAC 51904 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| || || || || || || | || || || || || Sbjct 51905 ATCCAGAAGGAGTCGACGCTGCACCTGGTGCTTCGCCTGCGTGGCGG 51951 Score = 131 bits (144), Expect = 2e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| ||||||||| | || || ||||| ||||| ||||| || ||| | Sbjct 51953 ATGCAGATCTTCGTCAAGACGTTGACGGGTAAGACGATTACCCTTGACGTGGAGCCGTCG 52012 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 ||| ||| | || | ||| || ||||||||||||||||| || ||||| |||||| Sbjct 52013 GATTCCATCGACAACGTCAAGCAAAAGATTCAGGACAAGGAGGGCATCCCTCCTGACCAG 52072 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| || || ||||| ||||| || ||||||| || || || ||||| || Sbjct 52073 CAGCGTCTGATCTTCGCTGGCAAGCAGCTGGAGGATGGCCGCACTCTGAGTGACTACAAC 52132 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || ||||| || || || || || || | || || || || || Sbjct 52133 ATTCAGAAGGAGTCGACGCTGCACCTGGTGCTTCGCCTGCGTGGCGG 52179 >seq12 Length=196586 Score = 140 bits (154), Expect = 4e-28 Identities = 354/534 (66%), Gaps = 7/534 (1%) Strand=Plus/Minus Query 64319 TGTGGGAGCTTTACAAGAAAGCCATCGCAAGTTTCTGGACGGTCGAGGAGGTTGATCTCG 64378 ||||| || | |||||||| || || |||||||||| |||||| ||||||||| Sbjct 58857 TGTGGCAGATGTACAAGAAGGCGGAGGCTTCCTTCTGGACGGCTGAGGAGCTTGATCTCG 58798 Query 64379 CCAAGGATCTCAGCGACTGGGAAAACCTAAACTCACAGGAACAGCACTTCATCAAGTTGG 64438 | || || | ||||||| ||||| | | || | || ||||||||| | Sbjct 58797 TGCACGACCTGAAGGACTGGGGCAACCTCACGGATAACGAGCGCCATTTCATCAAGCACG 58738 Query 64439 TCCTAGCATTCTTCGCATCAAGTGACGGAATTGTGTTTGAGAATTTGGACCTAAATTTTA 64498 | || || |||||||| | || ||||| || ||| ||||| ||| | | || || | Sbjct 58737 TGCTCGCTTTCTTCGCTGCCAGCGACGGTATCGTGAACGAGAACCTGGCCATGAACTTCA 58678 Query 64499 CAAAGGATGTTCAGATCCCAGAGGCGCGGTCATTCTATGCGTATCAGGGATTT--AACGA 64556 || || || ||| | || || || || | ||||| | | ||| ||| | || Sbjct 58677 GCAATGAGGTGCAGGTGCCTGAAGCTCGCTGCTTCTACGGCTTCCAG--ATTGCCATTGA 58620 Query 64557 AAGTATTCATGGCGAGACGTATTCGCTCATGATTGACAAGTTTGTTCGGGATCCTGTCGA 64616 | ||||| ||| || ||||| | || |||| || | ||| | | || Sbjct 58619 GAACATTCACTCGGAGGTCTACTCGCTGCTCATCGACACGTACATCAAGGACACCATTGA 58560 Query 64617 GAAGGATGGACTGTTCAGGGCTATAGAGACTGTACCCGCTGTTACTAAAAAGGCTGAATG 64676 |||||| || | | ||||| ||||| | ||| ||| || |||||| | || Sbjct 58559 GAAGGACCACCTTCTGCGTGCTATCGAGACCATTCCCTGTGTGCAGAAGAAGGCTAACTG 58500 Query 64677 GGCCATCCGGTGGA-TGAATCG--TGGGTCGTCGTTTGGTCAGCGTCTCGCAGCTTTTGC 64733 |||| || ||||| ||| || || ||| || | | ||||||| | ||||| || Sbjct 58499 GGCCCTCAGGTGGTGTGACCCGCGTGTGTCATCCTACGCGGAGCGTCTGGTTGCTTTCGC 58440 Query 64734 CTGTGTGGAAGGAATTTTCTTTTCTGGGTCATTCTGTTCTATTTTCTGGCTAAAAAAGCG 64793 ||||| || ||||||||||| || || ||||| || || |||||||| || ||||| Sbjct 58439 TGCGGTGGAGGGCATTTTCTTTTCGGGATCCTTCTGCTCCATCTTCTGGCTCAAGAAGCG 58380 Query 64794 GGGCCTGATGCCAGGTCTGTCGTTTTCGAACGAGCTGATCTCTCGGGACGAGGG 64847 ||||| ||||| |||||| || ||||||||||| || || |||||||| Sbjct 58379 CGGCCTCATGCCTGGTCTGAGCTTCTCGAACGAGCTCATTAGCCGTGACGAGGG 58326 >seq1294 Length=4314 Score = 138 bits (152), Expect = 1e-27 Identities = 169/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||| ||||| | || || ||||| || || || || || ||| | Sbjct 4065 ATGCAGATCTTTGTGAAGACTTTGACGGGGAAGACGATCACGCTGGACGTGGAGCCGTCG 4124 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || || | || ||||| || ||||||||||||||||| |||||||| |||||| Sbjct 4125 GACTCTATCGACAACGTGAAGCAGAAGATTCAGGACAAGGAGGGCATTCCTCCTGACCAG 4184 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAA 27584 ||||| | || || || || ||||| || ||||| | |||||| || ||| ||||| || Sbjct 4185 CAGCGATTGATCTTCGCCGGCAAGCAGCTGGAGGACGGTCGTACGCTGAGC-GACTACAA 4243 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| || |||||||| || || |||| || |||||||| Sbjct 4244 CATCCAGAAGGAGTCTACTCTTCACCTGGTGCTGCGACTGCGCGGTGG 4291 Score = 136 bits (150), Expect = 5e-27 Identities = 169/229 (74%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| ||||| || ||||| | || || ||||| || || || || || ||| | Sbjct 3836 AATGCAGATCTTCGTGAAGACTTTGACGGGGAAGACGATCACGCTGGACGTGGAGCCGTC 3895 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 || || | || ||||| || ||||||||||||||||| |||||||| ||||| Sbjct 3896 GGACTCTATCGACAACGTGAAGCAGAAGATTCAGGACAAGGAGGGCATTCCTCCTGACCA 3955 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATA 27583 |||||| | || || || || ||||| || ||||| | |||||| || ||| ||||| | Sbjct 3956 GCAGCGATTGATCTTCGCCGGCAAGCAGCTGGAGGACGGTCGTACGCTGAGC-GACTACA 4014 Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | |||| ||||| || |||||||| || || |||| || |||||||| Sbjct 4015 ACATCCAGAAGGAGTCTACTCTTCACCTGGTGCTGCGACTGCGCGGTGG 4063 >seq122 Length=66504 Score = 132 bits (146), Expect = 5e-26 Identities = 145/193 (75%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 27403 ATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCA 27462 || ||||| |||||||| ||||| || || |||||||| || || || || || ||| | Sbjct 10890 ATCATGCAGATCTTTGTGAAGACCCTGACGGGCAAGACCATCACGCTGGACGTGGAGCCG 10949 Query 27463 GGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522 || ||||||| ||| | ||| ||||| ||||||||||| ||||| || || ||| Sbjct 10950 TCCGACAGCATTGACAATGTCAAGCAGAAAATCCAGGACAAGGAAGGAATCCCGCCTGAC 11009 Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTAT 27582 ||||||||||| || || || || ||||| |||||||| | || || || | ||||| Sbjct 11010 CAGCAGCGTCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACGCTCTCGGACTAC 11069 Query 27583 AATGTCCAAAAGG 27595 || |||| |||| Sbjct 11070 AACATCCAGAAGG 11082 >seq55 Length=127487 Score = 125 bits (138), Expect = 8e-24 Identities = 355/535 (66%), Gaps = 9/535 (2%) Strand=Plus/Minus Query 64319 TGTGGGAGCTTTACAAGAAAGCCATCGCAAGTTTCTGGACGGTCGAGGAGGTTGATCTCG 64378 ||||| || | |||||||||||| ||| ||||||||| | |||||| | || || | Sbjct 36300 TGTGGCAGATGTACAAGAAAGCCGAGGCATCTTTCTGGACTGCCGAGGAACTCGACCTGG 36241 Query 64379 CCAAGGATCTCAGCGACTGGGAAAACCTAAACTCACAG-GAACAGCACTTCATCAAGTTG 64437 | || || | |||||||| || || | | ||| || | |||||||||||| Sbjct 36240 TACACGACCTGAACGACTGGGCCAAGCTGA-CGGACAATGAGCGCCACTTCATCAAGCAC 36182 Query 64438 GTCCTAGCATTCTTCGCATCAAGTGACGGAATTGTGTTTGAGAATTTGGACCTAAATTTT 64497 || || || || |||||| |||||||||| || || ||||| | | | | || || Sbjct 36181 GTGCTCGCCTTTTTCGCAGCAAGTGACGGTATCGTTAACGAGAACCTAGCCATGAACTTC 36122 Query 64498 ACAAAGGATGTTCAGATCCCAGAGGCGCGGTCATTCTATGCGTATCAGGGATTTAACGAA 64557 | || || | ||| | || ||||| || | ||||| | | ||| | | || Sbjct 36121 AGCAATGAGATCCAGGTGCCCGAGGCCCGCTGCTTCTACGGTTTCCAGATAGCCATTGAG 36062 Query 64558 AGTATTCATGGCGAGACGTATTCGCTCATGATTGACAAGTTTGTTCGGGATCCTGTCGAG 64617 | ||| || || || || || |||| |||| || | ||| | |||||| Sbjct 36061 AATATCCACTCGGAAGTTTACTCCCTGCTGATCGACACGTACATCAAGGACACAGTCGAG 36002 Query 64618 AAGGATGGACTGTTCAGGGCTATAGAGACTGTACCCGCTGT-TACTAAA-AAGGCTGAAT 64675 || ||| ||| | | || || ||||| | |||| ||| | | ||| ||||| | | Sbjct 36001 AAAGATTATCTGCTGCGTGCCATCGAGACGAT-CCCG-TGTGTGCAAAAGAAGGCGAACT 35944 Query 64676 GGGCCATCCGGTGGA-TGAA--TCGTGGGTCGTCGTTTGGTCAGCGTCTCGCAGCTTTTG 64732 |||| || ||||| ||| ||||| ||| || | |||| || || || | Sbjct 35943 GGGCTCTCAGGTGGTGTGATCCTCGTGTGTCTTCTTACCCGGAGCGGCTGCTGGCGTTCG 35884 Query 64733 CCTGTGTGGAAGGAATTTTCTTTTCTGGGTCATTCTGTTCTATTTTCTGGCTAAAAAAGC 64792 | ||||| || || ||||| || || || ||||| || || |||||||| || |||| Sbjct 35883 CAGCAGTGGAGGGCATCTTCTTCTCGGGATCGTTCTGCTCGATCTTCTGGCTCAAGAAGC 35824 Query 64793 GGGGCCTGATGCCAGGTCTGTCGTTTTCGAACGAGCTGATCTCTCGGGACGAGGG 64847 | ||||| ||||| ||||| || ||||||||| ||||| ||||||||||| Sbjct 35823 GCGGCCTCATGCCTGGTCTCAGCTTCTCGAACGAGATGATCAGCCGGGACGAGGG 35769 >seq192 Length=66663 Score = 118 bits (130), Expect = 1e-21 Identities = 188/268 (70%), Gaps = 4/268 (1%) Strand=Plus/Plus Query 31984 GACGGCCTCAAGCCTTCACAGCGCAAGGTGATATACGCCTGCCTCAAGAAGAACCTGTCG 32043 || || |||||| || ||||| |||||| | | ||||| | ||| ||| | || Sbjct 52255 GATGGGCTCAAGATCTCGCAGCGGAAGGTGCTTTTTGCCTGTTTGAAGCGGAAATTAACG 52314 Query 32044 AGTGACATGAAGGTGGCGCAGCTGTCGGGCTACGTGGCAG--AGCAAACGGCCTATCACC 32101 ||||| |||| |||||||| ||| | || ||| |||| |||| ||||| ||||||| Sbjct 52315 AGTGAAGTGAAAGTGGCGCAACTGGCTGGTTACT--GCAGTGAGCACACGGCGTATCACC 52372 Query 32102 ACGGCGAGGCGTCGCTCCAGGGCACCATTGTCAACCTTGCTCAGAACTTTGTCGGTGCAA 32161 | || || || || || || || ||||||||| | || || | |||||||| | | Sbjct 52373 ATGGAGAAGCTTCTCTACACTCGACGATTGTCAACATGGCGCAAGATTTTGTCGGCTCCA 52432 Query 32162 ATAACCTGAACTTACTCGAGCCATCTGGACAGTTTGGGACCCGGCTCGCCGGTGGCAAGG 32221 ||||||| | || | || || ||||||||||| || ||| | || || || | Sbjct 52433 ATAACCTCCCGCTGCTGTATCCGTCCGGACAGTTTGGTACTCGGTTGCAAGGAGGAAAAG 52492 Query 32222 ATGCTGCGAGCTCCCGTTACATCTTCAC 32249 ||||||| || | || ||||||||||| Sbjct 52493 ATGCTGCCAGTCCTCGATACATCTTCAC 52520 >seq228 Length=47695 Score = 87.8 bits (96), Expect = 2e-12 Identities = 84/108 (78%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| || || |||||||| ||||| |||||||| || || ||||| || ||| | Sbjct 37978 AATGCAGATTTTCGTCAAGACCCTTACGGGCAAGACCATCACGCTTGACGTGGAGCCGTC 37919 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAAT 27512 || ||||||| ||| | ||| |||||||||||||||||||| || Sbjct 37918 GGACAGCATTGACAATGTCAAGCAGAAAATTCAGGACAAGGAGGGTAT 37871 Score = 86.0 bits (94), Expect = 7e-12 Identities = 94/125 (75%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 27508 GGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGT 27567 ||||| || || |||||||||||||| || || ||||| ||||| || ||||| | || Sbjct 37802 GGAATCCCCCCTGACCAGCAGCGTCTGATCTTCGCTGGCAAGCAGCTGGAGGACGGCCGC 37743 Query 27568 ACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGC 27627 || || | ||||| || |||| ||||| || || || || || || ||||||| || Sbjct 37742 ACTCTTTCGGACTACAACATCCAGAAGGAGTCGACCCTGCACCTGGTGCTGCGTCTGCGT 37683 Query 27628 GGTGG 27632 ||||| Sbjct 37682 GGTGG 37678 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570290710033440